RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 RASAL3Q86YV0 1011 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 FOXP4Q8IVH2 680 aaPredicted RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 MAPKAPK5Q8IW41 473 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.75□□□□□ -1.015e-10■□□□□ 9.2
GYPB-206ENST00000506516 EVI5LQ96CN4 794 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 FSD1Q9BTV5 496 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 TRIM34Q9BYJ4 488 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 CRNKL1Q9BZJ0 848 aaKnown RBP8.75□□□□□ -1.01
GYPB-206ENST00000506516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.75□□□□□ -1.01
GYPB-206ENST00000506516 ZNF112Q9UJU3 913 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 PAPPA2Q9BXP8 1791 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
GYPB-206ENST00000506516 MANSC4A6NHS7 340 aaPredicted RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 GPR37O15354 613 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 CA12O43570 354 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 HLA-DOAP06340 250 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 NUDT7P0C024 238 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 VGLL4Q14135 290 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 SPRYD7Q5W111 196 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 TICAM2Q86XR7 235 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 CRACR2BQ8N4Y2 399 aaPredicted RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 ZKSCAN4Q969J2 545 aaPredicted RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 CLMNQ96JQ2 1002 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 EPAS1Q99814 870 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 RIOK1Q9BRS2 568 aaKnown RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 OSBPL3Q9H4L5 887 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 ELP3Q9H9T3 547 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 ATP8A2Q9NTI2 1148 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 WBP1LQ9NX94 342 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 HERC5Q9UII4 1024 aaKnown RBP8.74□□□□□ -1.01
GYPB-206ENST00000506516 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 FLT1P17948 1338 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 AKAP11Q9UKA4 1901 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 MYH2Q9UKX2 1941 aa8.74□□□□□ -1.01
GYPB-206ENST00000506516 ATRNL1Q5VV63 1379 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 CTNND1O60716 968 aaKnown RBP8.73□□□□□ -1.01
GYPB-206ENST00000506516 MBD4O95243 580 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
GYPB-206ENST00000506516 HSPA1AP0DMV8 641 aaKnown RBP8.73□□□□□ -1.01
GYPB-206ENST00000506516 HSPA1BP0DMV9 641 aaKnown RBP8.73□□□□□ -1.01
GYPB-206ENST00000506516 TM4SF4P48230 202 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 OTUD7BQ6GQQ9 843 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 AMOTL1Q8IY63 956 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 LCORLQ8N3X6 602 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 APPBP2Q92624 585 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.013e-6■■■□□ 17.7
GYPB-206ENST00000506516 RILPL2Q969X0 211 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 ARMT1Q9H993 441 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 PICK1Q9NRD5 415 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 SAP30BPQ9UHR5 308 aaKnown RBP8.73□□□□□ -1.01
GYPB-206ENST00000506516 PALD1Q9ULE6 856 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 SLC4A4Q9Y6R1 1079 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 PCNTO95613 3336 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 RFX7Q2KHR2 1363 aa8.73□□□□□ -1.01
GYPB-206ENST00000506516 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 GNAT2P19087 354 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 INPP5BP32019 993 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 GTF2A2P52657 109 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 PPATQ06203 517 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 NOL9Q5SY16 702 aaKnown RBP8.72□□□□□ -1.01
GYPB-206ENST00000506516 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 CENPQQ7L2Z9 268 aaPredicted RBP8.72□□□□□ -1.01
GYPB-206ENST00000506516 METTL16Q86W50 562 aaKnown RBP8.72□□□□□ -1.01
GYPB-206ENST00000506516 SCYL3Q8IZE3 742 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
GYPB-206ENST00000506516 ZIC5Q96T25 663 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
GYPB-206ENST00000506516 MCM9Q9NXL9 1143 aa8.72□□□□□ -1.01
GYPB-206ENST00000506516 COL2A1P02458 1487 aaPredicted RBP8.71□□□□□ -1.01
GYPB-206ENST00000506516 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 PATL2C9JE40 543 aaKnown RBP8.71□□□□□ -1.02
GYPB-206ENST00000506516 MAP3K7O43318 606 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 ALDH1A1P00352 501 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 CHGBP05060 677 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 CTCFP49711 727 aaPredicted RBP8.71□□□□□ -1.02
GYPB-206ENST00000506516 TYW1BQ6NUM6 668 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 GIMAP6Q6P9H5 292 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 OSBP2Q969R2 916 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 HS3ST6Q96QI5 342 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 STRBPQ96SI9 672 aaKnown RBP8.71□□□□□ -1.02
GYPB-206ENST00000506516 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 EHD4Q9H223 541 aa8.71□□□□□ -1.02
GYPB-206ENST00000506516 DCP1AQ9NPI6 582 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms