RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 CDK8P49336 464 aa11.42□□□□□ -0.58
RETREG1-203ENST00000506441 EIF6P56537 245 aaKnown RBP11.42□□□□□ -0.58
RETREG1-203ENST00000506441 MEGF10Q96KG7 1140 aa11.42□□□□□ -0.58
RETREG1-203ENST00000506441 MAP4P27816 1152 aaKnown RBP11.41□□□□□ -0.58
RETREG1-203ENST00000506441 TMEM201Q5SNT2 666 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 SLC6A19Q695T7 634 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 CLEC10AQ8IUN9 316 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 FAM105AQ9NUU6 356 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 REV1Q9UBZ9 1251 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 POLR3KQ9Y2Y1 108 aaPredicted RBP11.41□□□□□ -0.58
RETREG1-203ENST00000506441 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
RETREG1-203ENST00000506441 BIVM-ERCC5R4GMW8 1640 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 FAM95CA0A1B0GW59 222 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 CLCQ05315 142 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 FAM20CQ8IXL6 584 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 FBLIM1Q8WUP2 373 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 TP53INP1Q96A56 240 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 ARMC5Q96C12 935 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 ACSS3Q9H6R3 686 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 R3HCC1Q9Y3T6 440 aaKnown RBP11.4□□□□□ -0.58
RETREG1-203ENST00000506441 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.58
RETREG1-203ENST00000506441 POLA1P09884 1462 aaPredicted RBP11.39□□□□□ -0.59
RETREG1-203ENST00000506441 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
RETREG1-203ENST00000506441 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
RETREG1-203ENST00000506441 NFKBIBQ15653 356 aa11.39□□□□□ -0.59
RETREG1-203ENST00000506441 ISL2Q96A47 359 aa11.39□□□□□ -0.59
RETREG1-203ENST00000506441 ZNRF3Q9ULT6 936 aa11.39□□□□□ -0.59
RETREG1-203ENST00000506441 STK10O94804 968 aaKnown RBP11.38□□□□□ -0.59
RETREG1-203ENST00000506441 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 CDPF1Q6NVV7 123 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 BEND4Q6ZU67 534 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 MCATQ8IVS2 390 aaKnown RBP11.38□□□□□ -0.59
RETREG1-203ENST00000506441 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
RETREG1-203ENST00000506441 GMIPQ9P107 970 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 CUX1P39880 1505 aa11.38□□□□□ -0.59
RETREG1-203ENST00000506441 NFICP08651 508 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 CAP2P40123 477 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 SGO2Q562F6 1265 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 MRPL41Q8IXM3 137 aaKnown RBP11.37□□□□□ -0.59
RETREG1-203ENST00000506441 MFSD2AQ8NA29 543 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 FAM13CQ8NE31 585 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 TMEM87BQ96K49 555 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 HIRIP3Q9BW71 556 aaPredicted RBP11.37□□□□□ -0.59
RETREG1-203ENST00000506441 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 CORINQ9Y5Q5 1042 aa11.37□□□□□ -0.59
RETREG1-203ENST00000506441 PLA2G4EQ3MJ16 856 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 TNNI3KQ59H18 835 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 ARMC10Q8N2F6 343 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 RBBP8NLQ8NC74 664 aaPredicted RBP11.36□□□□□ -0.59
RETREG1-203ENST00000506441 UBXN4Q92575 508 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 FOXQ1Q9C009 403 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 PPT2Q9UMR5 302 aa11.36□□□□□ -0.59
RETREG1-203ENST00000506441 LRIG2O94898 1065 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 FGRP09769 529 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 GTF2F1P35269 517 aaKnown RBP eCLIP11.35□□□□□ -0.59
RETREG1-203ENST00000506441 MCF2L2Q86YR7 1114 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
RETREG1-203ENST00000506441 SEMA6CQ9H3T2 930 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 KLHL3Q9UH77 587 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
RETREG1-203ENST00000506441 NEFMP07197 916 aa11.34□□□□□ -0.59
RETREG1-203ENST00000506441 TMEM40Q8WWA1 233 aa11.34□□□□□ -0.59
RETREG1-203ENST00000506441 ACSF2Q96CM8 615 aaPredicted RBP11.34□□□□□ -0.59
RETREG1-203ENST00000506441 ANAPC16Q96DE5 110 aa11.34□□□□□ -0.59
RETREG1-203ENST00000506441 TM9SF2Q99805 663 aa11.34□□□□□ -0.59
RETREG1-203ENST00000506441 TJP2Q9UDY2 1190 aa11.34□□□□□ -0.59
RETREG1-203ENST00000506441 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
RETREG1-203ENST00000506441 SLC22A31A6NKX4 558 aa11.33□□□□□ -0.6
RETREG1-203ENST00000506441 GSC2O15499 205 aa11.33□□□□□ -0.6
RETREG1-203ENST00000506441 CST3P01034 146 aaPredicted RBP11.33□□□□□ -0.6
RETREG1-203ENST00000506441 RAG1P15918 1043 aa11.33□□□□□ -0.6
RETREG1-203ENST00000506441 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
RETREG1-203ENST00000506441 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
RETREG1-203ENST00000506441 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
RETREG1-203ENST00000506441 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
RETREG1-203ENST00000506441 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 MEIS3P2A8K0S8 358 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 GIPRP48546 466 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 CCDC81Q6ZN84 652 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 SLFN12Q8IYM2 578 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 PHACTR4Q8IZ21 702 aa11.32□□□□□ -0.6
RETREG1-203ENST00000506441 IGHA1P01876 353 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 GBP1P32455 592 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 NTF4P34130 210 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 CCNFP41002 786 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 CDCP2Q5VXM1 449 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
RETREG1-203ENST00000506441 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 CCDC74BQ96LY2 380 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 GAPVD1Q14C86 1478 aa11.31□□□□□ -0.6
RETREG1-203ENST00000506441 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
RETREG1-203ENST00000506441 MSTNO14793 375 aa11.3□□□□□ -0.6
RETREG1-203ENST00000506441 SLBPQ14493 270 aaKnown RBP eCLIP11.3□□□□□ -0.6
RETREG1-203ENST00000506441 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
RETREG1-203ENST00000506441 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms