RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 GDF11O95390 407 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 USP5P45974 858 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 BACE1P56817 501 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 IRF5Q13568 498 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 PXYLP1Q8TE99 480 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 GINM1Q9NU53 330 aa30.07■■■□□ 2.4
HERC4-212ENST00000505760 JAG1P78504 1218 aa30.06■■■□□ 2.4
HERC4-212ENST00000505760 HABP4Q5JVS0 413 aaKnown RBP30.06■■■□□ 2.4
HERC4-212ENST00000505760 UNC93B1Q9H1C4 597 aa30.06■■■□□ 2.4
HERC4-212ENST00000505760 ANTXR1Q9H6X2 564 aa30.06■■■□□ 2.4
HERC4-212ENST00000505760 IL1RAPL2Q9NP60 686 aa30.06■■■□□ 2.4
HERC4-212ENST00000505760 INHAP05111 366 aa30.05■■■□□ 2.4
HERC4-212ENST00000505760 IRX3P78415 501 aaPredicted RBP30.05■■■□□ 2.4
HERC4-212ENST00000505760 TMED8Q6PL24 325 aaPredicted RBP30.05■■■□□ 2.4
HERC4-212ENST00000505760 RHPN1Q8TCX5 695 aa30.05■■■□□ 2.4
HERC4-212ENST00000505760 ZBTB21Q9ULJ3 1066 aa30.05■■■□□ 2.4
HERC4-212ENST00000505760 C19orf81C9J6K1 198 aa30.04■■■□□ 2.4
HERC4-212ENST00000505760 USP17L10C9JJH3 530 aa30.03■■■□□ 2.4
HERC4-212ENST00000505760 SHROOM1Q2M3G4 852 aaPredicted RBP30.03■■■□□ 2.4
HERC4-212ENST00000505760 U2AF1L4Q8WU68 220 aaKnown RBP30.03■■■□□ 2.4
HERC4-212ENST00000505760 PCDH10Q9P2E7 1040 aa30.03■■■□□ 2.4
HERC4-212ENST00000505760 APBB1O00213 710 aa30.02■■■□□ 2.4
HERC4-212ENST00000505760 RPAP2Q8IXW5 612 aaPredicted RBP30.02■■■□□ 2.4
HERC4-212ENST00000505760 CLASRPQ8N2M8 674 aaKnown RBP30.02■■■□□ 2.4
HERC4-212ENST00000505760 DPF3Q92784 378 aa30.02■■■□□ 2.4
HERC4-212ENST00000505760 DDX19BQ9UMR2 479 aa30.02■■■□□ 2.4
HERC4-212ENST00000505760 HMMRO75330 724 aa30.01■■■□□ 2.39
HERC4-212ENST00000505760 HOXA7P31268 230 aaPredicted RBP30.01■■■□□ 2.39
HERC4-212ENST00000505760 TTF1Q15361 905 aaPredicted RBP30.01■■■□□ 2.39
HERC4-212ENST00000505760 SGPL1O95470 568 aa30■■■□□ 2.39
HERC4-212ENST00000505760 KIF1BPQ96EK5 621 aa30■■■□□ 2.39
HERC4-212ENST00000505760 BCL11AQ9H165 835 aa30■■■□□ 2.39
HERC4-212ENST00000505760 SERPINB13Q9UIV8 391 aa30■■■□□ 2.39
HERC4-212ENST00000505760 COG6Q9Y2V7 657 aa30■■■□□ 2.39
HERC4-212ENST00000505760 H0YGN5 161 aa29.99■■■□□ 2.39
HERC4-212ENST00000505760 GH2P01242 217 aa29.99■■■□□ 2.39
HERC4-212ENST00000505760 TTC6Q86TZ1 520 aa29.99■■■□□ 2.39
HERC4-212ENST00000505760 P2RX7Q99572 595 aaKnown RBP29.99■■■□□ 2.39
HERC4-212ENST00000505760 HTATIP2Q9BUP3 242 aa29.99■■■□□ 2.39
HERC4-212ENST00000505760 MORF4L1Q9UBU8 362 aa29.99■■■□□ 2.39
HERC4-212ENST00000505760 FARP2O94887 1054 aaPredicted RBP29.98■■■□□ 2.39
HERC4-212ENST00000505760 IFIT2P09913 472 aaKnown RBP29.98■■■□□ 2.39
HERC4-212ENST00000505760 EHD4Q9H223 541 aa29.98■■■□□ 2.39
HERC4-212ENST00000505760 HERVK_113P62684 666 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 SLC9C2Q5TAH2 1124 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 TATDN1Q6P1N9 297 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 UBE2Q1Q7Z7E8 422 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 DEFB118Q96PH6 123 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 ZBTB40Q9NUA8 1239 aa29.97■■■□□ 2.39
HERC4-212ENST00000505760 MAGEB6P1A0A0J9YX57 407 aa29.96■■■□□ 2.39
HERC4-212ENST00000505760 TFRCP02786 760 aaKnown RBP29.96■■■□□ 2.39
HERC4-212ENST00000505760 USP17L2Q6R6M4 530 aa29.96■■■□□ 2.39
HERC4-212ENST00000505760 FEZ1Q99689 392 aa29.96■■■□□ 2.39
HERC4-212ENST00000505760 RIOK1Q9BRS2 568 aaKnown RBP29.96■■■□□ 2.39
HERC4-212ENST00000505760 CHMP4BQ9H444 224 aaKnown RBP29.96■■■□□ 2.39
HERC4-212ENST00000505760 COLQQ9Y215 455 aaPredicted RBP29.96■■■□□ 2.39
HERC4-212ENST00000505760 CERKLQ49MI3 558 aaPredicted RBP29.95■■■□□ 2.39
HERC4-212ENST00000505760 GPRC5AQ8NFJ5 357 aa29.95■■■□□ 2.39
HERC4-212ENST00000505760 DNAJC2Q99543 621 aaKnown RBP29.95■■■□□ 2.39
HERC4-212ENST00000505760 PAK6Q9NQU5 681 aaPredicted RBP29.95■■■□□ 2.39
HERC4-212ENST00000505760 GJD2Q9UKL4 321 aa29.95■■■□□ 2.39
HERC4-212ENST00000505760 NAV1Q8NEY1 1877 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 GOLIM4O00461 696 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 HMGCRP04035 888 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 PDE6AP16499 860 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 CAPN2P17655 700 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 RAB3GAP1Q15042 981 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 SIRT2Q8IXJ6 389 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.94■■■□□ 2.38
HERC4-212ENST00000505760 EMILIN3Q9NT22 766 aa29.94■■■□□ 2.38
HERC4-212ENST00000505760 RAB11FIP3O75154 756 aa29.93■■■□□ 2.38
HERC4-212ENST00000505760 POLR3DP05423 398 aaPredicted RBP29.93■■■□□ 2.38
HERC4-212ENST00000505760 ABCB5Q2M3G0 1257 aa29.93■■■□□ 2.38
HERC4-212ENST00000505760 CRNKL1Q9BZJ0 848 aaKnown RBP29.93■■■□□ 2.38
HERC4-212ENST00000505760 TXNRD2Q9NNW7 524 aa29.93■■■□□ 2.38
HERC4-212ENST00000505760 RCAN3Q9UKA8 241 aa29.93■■■□□ 2.38
HERC4-212ENST00000505760 PEX10O60683 326 aa29.92■■■□□ 2.38
HERC4-212ENST00000505760 ZYXQ15942 572 aaKnown RBP29.92■■■□□ 2.38
HERC4-212ENST00000505760 CCAR1Q8IX12 1150 aaKnown RBP29.92■■■□□ 2.38
HERC4-212ENST00000505760 GTF3C2Q8WUA4 911 aaPredicted RBP29.92■■■□□ 2.38
HERC4-212ENST00000505760 CABP5Q9NP86 173 aa29.92■■■□□ 2.38
HERC4-212ENST00000505760 PLXNB2O15031 1838 aa29.92■■■□□ 2.38
HERC4-212ENST00000505760 DDX60LQ5H9U9 1706 aaKnown RBP29.91■■■□□ 2.38
HERC4-212ENST00000505760 PLCD1P51178 756 aa29.91■■■□□ 2.38
HERC4-212ENST00000505760 PAGR1Q9BTK6 254 aa29.91■■■□□ 2.38
HERC4-212ENST00000505760 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.91■■■□□ 2.38
HERC4-212ENST00000505760 RBPJLQ9UBG7 517 aa29.91■■■□□ 2.38
HERC4-212ENST00000505760 ZNF532Q9HCE3 1301 aa29.91■■■□□ 2.38
HERC4-212ENST00000505760 USP14P54578 494 aa29.9■■■□□ 2.38
HERC4-212ENST00000505760 CYP2B6P20813 491 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 MAPK4P31152 587 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 SHMT1P34896 483 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 ERVK-9P63128 1117 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 ERVK-24P63145 666 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 PDE3AQ14432 1141 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 SOCS4Q8WXH5 440 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 C12orf42Q96LP6 360 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 NUDT12Q9BQG2 462 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 MCM9Q9NXL9 1143 aa29.89■■■□□ 2.38
HERC4-212ENST00000505760 NR2E3Q9Y5X4 410 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms