RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 P4HA1P13674 534 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 KARSQ15046 597 aaKnown RBP5.78□□□□□ -1.48
MATR3-211ENST00000505625 TOMM20Q15388 145 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 FAM196AQ6ZSG2 479 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 CCDC110Q8TBZ0 833 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 KIAA1524Q8TCG1 905 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 DNAAF4Q8WXU2 420 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 ZSCAN32Q9NX65 697 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 TSKSQ9UJT2 592 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 ATP6V0A2Q9Y487 856 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 ACEP12821 1306 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 PCDH11XQ9BZA7 1347 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 PCDH11YQ9BZA8 1340 aa5.78□□□□□ -1.48
MATR3-211ENST00000505625 URB2Q14146 1524 aaKnown RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 PBRM1Q86U86 1689 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 HNRNPCL2B2RXH8 293 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 HNRNPCL1O60812 293 aaKnown RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 ESRRBO95718 433 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 KIF4BQ2VIQ3 1234 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TTLL7Q6ZT98 887 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 KIFAP3Q92845 792 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 KIF1BPQ96EK5 621 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 EXO5Q9H790 373 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 SLC52A1Q9NWF4 448 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 VIMP08670 466 aaKnown RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 ATF7P17544 494 aaPredicted RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 VCPP55072 806 aaKnown RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 OTUD6AQ7L8S5 288 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TAB3Q8N5C8 712 aaPredicted RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 NCOA7Q8NI08 942 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TEKT1Q969V4 418 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 EXOC4Q96A65 974 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 LRRC27Q9C0I9 530 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 CLIP2Q9UDT6 1046 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 LRRIQ4A6NIV6 560 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 SLC12A2P55011 1212 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 APPL2Q8NEU8 664 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 FLAD1Q8NFF5 587 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 SNX25Q9H3E2 840 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 MAN1C1Q9NR34 630 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 CCPG1Q9ULG6 757 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 ARID4AP29374 1257 aaPredicted RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 KRT2P35908 639 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 EPHB1P54762 984 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 NAA25Q14CX7 972 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TMCO3Q6UWJ1 677 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TTC6Q86TZ1 520 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 SELENOSQ9BQE4 189 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 CWC15Q9P013 229 aaKnown RBP5.77□□□□□ -1.49
MATR3-211ENST00000505625 ATP11BQ9Y2G3 1177 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 MAST3O60307 1309 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 MAPK9P45984 424 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 CENPAP49450 140 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 ZNF75DP51815 510 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 GNPTABQ3T906 1256 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 OTUD5Q96G74 571 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 FAM89AQ96GI7 184 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 SPAG5Q96R06 1193 aa5.77□□□□□ -1.49
MATR3-211ENST00000505625 CCDC192P0DO97 292 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 NXNQ6DKJ4 435 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SEPT12Q8IYM1 358 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 EMILIN1Q9Y6C2 1016 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SKAP2O75563 359 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 GSTA1P08263 222 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 GSTA2P09210 222 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 EPB41P11171 864 aaKnown RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 MCM2P49736 904 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 STX17P56962 302 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 CCDC85BQ15834 202 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 SLC9C1Q4G0N8 1177 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 DSTYKQ6XUX3 929 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 KRT26Q7Z3Y9 468 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 NR1H4Q96RI1 486 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 TRIM7Q9C029 511 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SMYD2Q9NRG4 433 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 DBF4Q9UBU7 674 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 PLB1Q6P1J6 1458 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 GRIN3BO60391 1043 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 YEATS4O95619 227 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SNAP25P60880 206 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.76□□□□□ -1.49
MATR3-211ENST00000505625 FMNL3Q8IVF7 1028 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 FAM161BQ96MY7 647 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 IL16Q14005 1332 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PRPF4O43172 522 aaKnown RBP eCLIP5.76□□□□□ -1.49
MATR3-211ENST00000505625 TYRO3Q06418 890 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PAN2Q504Q3 1202 aaKnown RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 SCN4BQ8IWT1 228 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 SYNE4Q8N205 404 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 ZNF277Q9NRM2 450 aaPredicted RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 ADAMTS8Q9UP79 889 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 ASMTLO95671 621 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 RALGDSQ12967 914 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 PUM3Q15397 648 aaKnown RBP5.76□□□□□ -1.49
MATR3-211ENST00000505625 CCDC6Q16204 474 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 NUDT18Q6ZVK8 323 aa5.76□□□□□ -1.49
MATR3-211ENST00000505625 ZSCAN16Q9H4T2 348 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms