RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 ABCF2Q9UG63 623 aa19.03■□□□□ 0.64
PDCD6-203ENST00000505526 PNMA3Q9UL41 463 aa19.03■□□□□ 0.64
PDCD6-203ENST00000505526 TTC41PQ6P2S7 1318 aa19.02■□□□□ 0.64
PDCD6-203ENST00000505526 RASGRF1Q13972 1273 aa19.02■□□□□ 0.63
PDCD6-203ENST00000505526 FAM110CQ1W6H9 321 aa19.02■□□□□ 0.63
PDCD6-203ENST00000505526 SPTY2D1Q68D10 685 aaPredicted RBP19.01■□□□□ 0.63
PDCD6-203ENST00000505526 PROCA1Q8NCQ7 364 aaPredicted RBP19.01■□□□□ 0.63
PDCD6-203ENST00000505526 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
PDCD6-203ENST00000505526 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
PDCD6-203ENST00000505526 ERC2O15083 957 aa19■□□□□ 0.63
PDCD6-203ENST00000505526 TBC1D12O60347 775 aa19■□□□□ 0.63
PDCD6-203ENST00000505526 ATP5JP18859 108 aa19■□□□□ 0.63
PDCD6-203ENST00000505526 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
PDCD6-203ENST00000505526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19■□□□□ 0.63
PDCD6-203ENST00000505526 MROH7-TTC4A0A0A0MT08 1334 aa19■□□□□ 0.63
PDCD6-203ENST00000505526 PDS5AQ29RF7 1337 aaKnown RBP19■□□□□ 0.63
PDCD6-203ENST00000505526 FAM196BA6NMK8 535 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 HMGCRP04035 888 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 BMP8BP34820 402 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 GCLCP48506 637 aaPredicted RBP18.99■□□□□ 0.63
PDCD6-203ENST00000505526 SPP2Q13103 211 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 C7orf61Q8IZ16 206 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 GDF15Q99988 308 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 ALPK3Q96L96 1907 aa18.99■□□□□ 0.63
PDCD6-203ENST00000505526 GPR75-ASB3A0A0A6YYF3 556 aa18.98■□□□□ 0.63
PDCD6-203ENST00000505526 GLRX3O76003 335 aaKnown RBP18.98■□□□□ 0.63
PDCD6-203ENST00000505526 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
PDCD6-203ENST00000505526 ARID4AP29374 1257 aaPredicted RBP18.98■□□□□ 0.63
PDCD6-203ENST00000505526 RHBDL3P58872 404 aa18.98■□□□□ 0.63
PDCD6-203ENST00000505526 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
PDCD6-203ENST00000505526 OSBPL5Q9H0X9 879 aaPredicted RBP18.98■□□□□ 0.63
PDCD6-203ENST00000505526 BOLA2Q9H3K6 86 aa18.98■□□□□ 0.63
PDCD6-203ENST00000505526 DOCK3Q8IZD9 2030 aa18.98■□□□□ 0.63
PDCD6-203ENST00000505526 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
PDCD6-203ENST00000505526 MECOMQ03112 1051 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 PABPC4Q13310 644 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDCD6-203ENST00000505526 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
PDCD6-203ENST00000505526 GJD2Q9UKL4 321 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 ZMYND8Q9ULU4 1186 aaPredicted RBP18.97■□□□□ 0.63
PDCD6-203ENST00000505526 RPTORQ8N122 1335 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 MCAMP43121 646 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 HMGCS2P54868 508 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 TTC22Q5TAA0 569 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDCD6-203ENST00000505526 NBPF3Q9H094 633 aa18.97■□□□□ 0.63
PDCD6-203ENST00000505526 LAMA3Q16787 3333 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 LOC285556D6RIA3 1793 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 TRIM32Q13049 653 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 GPR153Q6NV75 609 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 PI16Q6UXB8 463 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 ZNF384Q8TF68 577 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
PDCD6-203ENST00000505526 HAUS7Q99871 368 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 ASCC2Q9H1I8 757 aaPredicted RBP18.96■□□□□ 0.63
PDCD6-203ENST00000505526 SNRKQ9NRH2 765 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 NDUFB9Q9Y6M9 179 aa18.96■□□□□ 0.63
PDCD6-203ENST00000505526 MAP4K4O95819 1239 aaPredicted RBP18.95■□□□□ 0.62
PDCD6-203ENST00000505526 GSPT1P15170 499 aaKnown RBP18.95■□□□□ 0.62
PDCD6-203ENST00000505526 CAP2P40123 477 aa18.95■□□□□ 0.62
PDCD6-203ENST00000505526 SPATA5Q8NB90 893 aa18.95■□□□□ 0.62
PDCD6-203ENST00000505526 C11orf49Q9H6J7 331 aa18.95■□□□□ 0.62
PDCD6-203ENST00000505526 HMG20BQ9P0W2 317 aa18.95■□□□□ 0.62
PDCD6-203ENST00000505526 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
PDCD6-203ENST00000505526 SYN1P17600 705 aa18.94■□□□□ 0.62
PDCD6-203ENST00000505526 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
PDCD6-203ENST00000505526 DEFB123Q8N688 67 aa18.94■□□□□ 0.62
PDCD6-203ENST00000505526 COL6A3P12111 3177 aa18.94■□□□□ 0.62
PDCD6-203ENST00000505526 LDHCP07864 332 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 ZAP70P43403 619 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 GSTO1P78417 241 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
PDCD6-203ENST00000505526 SH3D19Q5HYK7 790 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 TRIB2Q92519 343 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 EDC3Q96F86 508 aaKnown RBP18.93■□□□□ 0.62
PDCD6-203ENST00000505526 MORF4L1Q9UBU8 362 aa18.93■□□□□ 0.62
PDCD6-203ENST00000505526 COL2A1P02458 1487 aaPredicted RBP18.93■□□□□ 0.62
PDCD6-203ENST00000505526 TRIM6-TRIM34B2RNG4 842 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 GOLIM4O00461 696 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 MAGEA10P43363 369 aaPredicted RBP18.92■□□□□ 0.62
PDCD6-203ENST00000505526 LRIT3Q3SXY7 679 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 NSUN4Q96CB9 384 aaKnown RBP18.92■□□□□ 0.62
PDCD6-203ENST00000505526 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 PAG1Q9NWQ8 432 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
PDCD6-203ENST00000505526 DDX60LQ5H9U9 1706 aaKnown RBP18.92■□□□□ 0.62
PDCD6-203ENST00000505526 ATAD5Q96QE3 1844 aa18.91■□□□□ 0.62
PDCD6-203ENST00000505526 CYP2B6P20813 491 aa18.91■□□□□ 0.62
PDCD6-203ENST00000505526 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
PDCD6-203ENST00000505526 TBC1D9Q6ZT07 1266 aa18.91■□□□□ 0.62
PDCD6-203ENST00000505526 Q7L0L9 218 aa18.91■□□□□ 0.62
PDCD6-203ENST00000505526 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
PDCD6-203ENST00000505526 SDSP20132 328 aa18.9■□□□□ 0.62
PDCD6-203ENST00000505526 IRX3P78415 501 aaPredicted RBP18.9■□□□□ 0.62
PDCD6-203ENST00000505526 TDHQ8IZJ6 230 aa18.9■□□□□ 0.62
PDCD6-203ENST00000505526 RILPL2Q969X0 211 aa18.9■□□□□ 0.62
PDCD6-203ENST00000505526 ANTXR1Q9H6X2 564 aa18.9■□□□□ 0.62
PDCD6-203ENST00000505526 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms