RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 SHROOM1Q2M3G4 852 aaPredicted RBP10.45□□□□□ -0.74
CTSB-205ENST00000505496 SLC4A8Q2Y0W8 1093 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 CERKLQ49MI3 558 aaPredicted RBP10.45□□□□□ -0.74
CTSB-205ENST00000505496 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 C16orf86Q6ZW13 317 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 CENPQQ7L2Z9 268 aaPredicted RBP10.45□□□□□ -0.74
CTSB-205ENST00000505496 ANKRD23Q86SG2 305 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 ZNF280CQ8ND82 737 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
CTSB-205ENST00000505496 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
CTSB-205ENST00000505496 SWAP70Q9UH65 585 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 ZBTB21Q9ULJ3 1066 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 MYH7P12883 1935 aa10.45□□□□□ -0.74
CTSB-205ENST00000505496 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 SMIM22K7EJ46 135 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 GPR25O00155 361 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 GDF11O95390 407 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 TBC1D8O95759 1140 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 GH2P01242 217 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 SDSP20132 328 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 GUCY1A2P33402 732 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 CRHR2Q13324 411 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 TTC22Q5TAA0 569 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 FASTKD5Q7L8L6 764 aaKnown RBP10.44□□□□□ -0.74
CTSB-205ENST00000505496 CCDC84Q86UT8 332 aaPredicted RBP10.44□□□□□ -0.74
CTSB-205ENST00000505496 IFNL3Q8IZI9 196 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 PROCA1Q8NCQ7 364 aaPredicted RBP10.44□□□□□ -0.74
CTSB-205ENST00000505496 FAM227BQ96M60 508 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 SLC45A1Q9Y2W3 748 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 AK9Q5TCS8 1911 aa10.44□□□□□ -0.74
CTSB-205ENST00000505496 DOCK1Q14185 1865 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 ADGRA2Q96PE1 1338 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 CYP2D7A0A087X1C5 515 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 TRIM75PA6NK02 468 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 CENPBP07199 599 aaPredicted RBP10.43□□□□□ -0.74
CTSB-205ENST00000505496 CDK8P49336 464 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 BACE1P56817 501 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 SPP2Q13103 211 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 ALX1Q15699 326 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 ABCB5Q2M3G0 1257 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 AMOTL1Q8IY63 956 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 SLC44A5Q8NCS7 719 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 RILPL2Q969X0 211 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 NACAP1Q9BZK3 213 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 AS3MTQ9HBK9 375 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 MYH1P12882 1939 aa10.43□□□□□ -0.74
CTSB-205ENST00000505496 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 C19orf81C9J6K1 198 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 HIP1O00291 1037 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 PDHXO00330 501 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 TLR2O60603 784 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
CTSB-205ENST00000505496 TAF1CQ15572 869 aaPredicted RBP10.42□□□□□ -0.74
CTSB-205ENST00000505496 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 CCDC129Q6ZRS4 1044 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 ZNF589Q86UQ0 364 aaPredicted RBP10.42□□□□□ -0.74
CTSB-205ENST00000505496 ZNF296Q8WUU4 475 aaPredicted RBP10.42□□□□□ -0.74
CTSB-205ENST00000505496 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 AGTPBP1Q9UPW5 1226 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 PHIPQ8WWQ0 1821 aa10.42□□□□□ -0.74
CTSB-205ENST00000505496 HTTP42858 3142 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 APPP05067 770 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 HSPD1P10809 573 aaKnown RBP10.41□□□□□ -0.74
CTSB-205ENST00000505496 TDO2P48775 406 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 HMGCS2P54868 508 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 MTMR2Q13614 643 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 C17orf99Q6UX52 265 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 TMEM179Q6ZVK1 233 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 C12orf42Q96LP6 360 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 KIAA1683Q9H0B3 1180 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 CABP5Q9NP86 173 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 ANAPC4Q9UJX5 808 aa10.41□□□□□ -0.74
CTSB-205ENST00000505496 FKTNO75072 461 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 NEFLP07196 543 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 FGRP09769 529 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 AKR1B1P15121 316 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 RASA1P20936 1047 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 HOXA7P31268 230 aaPredicted RBP10.4□□□□□ -0.74
CTSB-205ENST00000505496 MFAP1P55081 439 aaKnown RBP10.4□□□□□ -0.74
CTSB-205ENST00000505496 SEPT2Q15019 361 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 TREML2Q5T2D2 321 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 SIAH1Q8IUQ4 282 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 PARK7Q99497 189 aaKnown RBP10.4□□□□□ -0.74
CTSB-205ENST00000505496 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTSB-205ENST00000505496 NAPBQ9H115 298 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
CTSB-205ENST00000505496 IGKV6D-41A0A0C4DH26 115 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
CTSB-205ENST00000505496 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms