RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ITPKAP23677 461 aa5.94□□□□□ -1.46
RFC1-208ENST00000504849 SERPINB4P48594 390 aa5.94□□□□□ -1.46
RFC1-208ENST00000504849 PUM1Q14671 1186 aaKnown RBP eCLIP5.94□□□□□ -1.466e-7■■■□□ 16.1
RFC1-208ENST00000504849 ZFYVE28Q9HCC9 887 aa5.94□□□□□ -1.46
RFC1-208ENST00000504849 BIN2Q9UBW5 565 aaPredicted RBP5.94□□□□□ -1.46
RFC1-208ENST00000504849 CNOT6Q9ULM6 557 aaKnown RBP5.94□□□□□ -1.46
RFC1-208ENST00000504849 NACADO15069 1562 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 GNAT3A8MTJ3 354 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 PRR33A8MZF0 331 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 SSPNQ14714 243 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 SF3A1Q15459 793 aaKnown RBP5.93□□□□□ -1.46
RFC1-208ENST00000504849 SPATS1Q496A3 300 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 UBE3DQ7Z6J8 389 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 FEZF2Q8TBJ5 459 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 UBXN4Q92575 508 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 SP110Q9HB58 689 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 SLAIN2Q9P270 581 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 KCTD3Q9Y597 815 aa5.93□□□□□ -1.46
RFC1-208ENST00000504849 DNAJC25-GNG10A0A024R161 153 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 HPXP02790 462 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 EIF1AXP47813 144 aaKnown RBP5.92□□□□□ -1.46
RFC1-208ENST00000504849 RALGPS1Q5JS13 557 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 CCDC120Q96HB5 630 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 RNF32Q9H0A6 362 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 DNAJC25Q9H1X3 360 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 KRT82Q9NSB4 513 aa5.92□□□□□ -1.46
RFC1-208ENST00000504849 ERCC6Q03468 1493 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 SEMA7AO75326 666 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 RAC2P15153 192 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 NTF4P34130 210 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 ZNF385BQ569K4 471 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 GALNT12Q8IXK2 581 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 RNF214Q8ND24 703 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 TTC16Q8NEE8 873 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 MYLIPQ8WY64 445 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 SLAMF8Q9P0V8 285 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
RFC1-208ENST00000504849 PEX10O60683 326 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 ZC3H12AQ5D1E8 599 aaKnown RBP5.9□□□□□ -1.46
RFC1-208ENST00000504849 FBXO33Q7Z6M2 555 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 HELQQ8TDG4 1101 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 FOXQ1Q9C009 403 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
RFC1-208ENST00000504849 MAPK8IP1Q9UQF2 711 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 ST14Q9Y5Y6 855 aa5.9□□□□□ -1.46
RFC1-208ENST00000504849 EIF4G1Q04637 1599 aaKnown RBP5.89□□□□□ -1.47
RFC1-208ENST00000504849 SCRIBQ14160 1630 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 H3BS24 57 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 SASH1O94885 1247 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 GSTP1P09211 210 aaKnown RBP5.89□□□□□ -1.47
RFC1-208ENST00000504849 MPSTP25325 297 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 TRHRP34981 398 aaPredicted RBP5.89□□□□□ -1.47
RFC1-208ENST00000504849 FAAP100Q0VG06 881 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 DIEXFQ68CQ4 756 aaKnown RBP5.89□□□□□ -1.47
RFC1-208ENST00000504849 PDZD3Q86UT5 571 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 FAM9AQ8IZU1 332 aaPredicted RBP5.89□□□□□ -1.47
RFC1-208ENST00000504849 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 ASB16Q96NS5 453 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 SGPP1Q9BX95 441 aa5.89□□□□□ -1.47
RFC1-208ENST00000504849 RECKO95980 971 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 ERVK-24P63145 666 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 C22orf34Q6ZV56 151 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 IRF2BP1Q8IU81 584 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 TMEM151BQ8IW70 566 aa5.88□□□□□ -1.47
RFC1-208ENST00000504849 ZSCAN29Q8IWY8 852 aaPredicted RBP5.88□□□□□ -1.47
RFC1-208ENST00000504849 PRDM5Q9NQX1 630 aaPredicted RBP5.88□□□□□ -1.47
RFC1-208ENST00000504849 TEX51A0A1B0GUA7 166 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 ICMTO60725 284 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 NCLP19338 710 aaKnown RBP5.87□□□□□ -1.47
RFC1-208ENST00000504849 NAALADL2Q58DX5 795 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 KIAA0319Q5VV43 1072 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 ZNF605Q86T29 641 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 ZDHHC14Q8IZN3 488 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
RFC1-208ENST00000504849 ADAM7Q9H2U9 754 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 DCTN4Q9UJW0 460 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 TMEM59LQ9UK28 342 aa5.87□□□□□ -1.47
RFC1-208ENST00000504849 WRNQ14191 1432 aaPredicted RBP eCLIP5.87□□□□□ -1.47
RFC1-208ENST00000504849 CADPSQ9ULU8 1353 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 SLC22A31A6NKX4 558 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 HK2P52789 917 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 PTPN12Q05209 780 aaKnown RBP5.86□□□□□ -1.47
RFC1-208ENST00000504849 ERICH6BQ5W0A0 696 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 GLYCTKQ8IVS8 523 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
RFC1-208ENST00000504849 H3BRB1 525 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 RFXAPO00287 272 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 PPM1GO15355 546 aaPredicted RBP5.85□□□□□ -1.47
RFC1-208ENST00000504849 SMARCA5O60264 1052 aaPredicted RBP5.85□□□□□ -1.47
RFC1-208ENST00000504849 TNFRSF1AP19438 455 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 PI3P19957 117 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 MAPK1P28482 360 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 ITGAEP38570 1179 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 ZNF157P51786 506 aaPredicted RBP5.85□□□□□ -1.47
RFC1-208ENST00000504849 EHHADHQ08426 723 aa5.85□□□□□ -1.47
RFC1-208ENST00000504849 SF3B2Q13435 895 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms