RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
CASC9-201ENST00000504531 CCDC8Q9H0W5 538 aaPredicted RBP10.39□□□□□ -0.75
CASC9-201ENST00000504531 ZSCAN16Q9H4T2 348 aaPredicted RBP10.39□□□□□ -0.75
CASC9-201ENST00000504531 DBNLQ9UJU6 430 aaKnown RBP10.39□□□□□ -0.75
CASC9-201ENST00000504531 ZKSCAN5Q9Y2L8 839 aa10.39□□□□□ -0.75
CASC9-201ENST00000504531 HRH3Q9Y5N1 445 aa10.39□□□□□ -0.75
CASC9-201ENST00000504531 COL22A1Q8NFW1 1626 aaPredicted RBP10.38□□□□□ -0.75
CASC9-201ENST00000504531 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
CASC9-201ENST00000504531 MYL6BP14649 208 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 LARP1BQ659C4 914 aaKnown RBP10.38□□□□□ -0.75
CASC9-201ENST00000504531 FAM227BQ96M60 508 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 NEK1Q96PY6 1258 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
CASC9-201ENST00000504531 ISCA1Q9BUE6 129 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 BOLA2Q9H3K6 86 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 PRDM11Q9NQV5 511 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
CASC9-201ENST00000504531 AKAP2Q9Y2D5 859 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
CASC9-201ENST00000504531 A0A0D9SFI3 127 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 SPATA31C2B4DYI2 1134 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 BACH1O14867 736 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 IL2RBP14784 551 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 EVCP57679 992 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
CASC9-201ENST00000504531 TFCP2Q12800 502 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 WDR44Q5JSH3 913 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 ATG9AQ7Z3C6 839 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 UBE3BQ7Z3V4 1068 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 ZNF512BQ96KM6 892 aaPredicted RBP10.37□□□□□ -0.75
CASC9-201ENST00000504531 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 USP25Q9UHP3 1055 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 TPCN1Q9ULQ1 816 aa10.37□□□□□ -0.75
CASC9-201ENST00000504531 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
CASC9-201ENST00000504531 COL5A2P05997 1499 aaPredicted RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 H3BM21 787 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 EYA2O00167 538 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 WFS1O76024 890 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 TLR1Q15399 786 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 ZMYM1Q5SVZ6 1142 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 NAA16Q6N069 864 aaPredicted RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 GTF3C6Q969F1 213 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 CAMKK2Q96RR4 588 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 DDX19AQ9NUU7 478 aaKnown RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 DNAAF2Q9NVR5 837 aaKnown RBP10.36□□□□□ -0.75
CASC9-201ENST00000504531 TCHHQ07283 1943 aa10.36□□□□□ -0.75
CASC9-201ENST00000504531 SPATA31A5Q5VU36 1347 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 SPATA31A7Q8IWB4 1347 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 CDHR2Q9BYE9 1310 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 PFKFB2O60825 505 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 EXOSC10Q01780 885 aaKnown RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 HSP90AB3PQ58FF7 597 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 GNASQ5JWF2 1037 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 NBPF10Q6P3W6 841 aaKnown RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 LMBR1LQ6UX01 489 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 TAS1R3Q7RTX0 852 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 CCDC155Q8N6L0 562 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 ZNF274Q96GC6 653 aaPredicted RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 TLR7Q9NYK1 1049 aaKnown RBP10.35□□□□□ -0.75
CASC9-201ENST00000504531 CTNNA3Q9UI47 895 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 CNPY2Q9Y2B0 182 aa10.35□□□□□ -0.75
CASC9-201ENST00000504531 TJP1Q07157 1748 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 CTAGE5O15320 804 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 LARGE1O95461 756 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 CSF1RP07333 972 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
CASC9-201ENST00000504531 IRF7Q92985 503 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 ARXQ96QS3 562 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 SIL1Q9H173 461 aa10.34□□□□□ -0.75
CASC9-201ENST00000504531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.34□□□□□ -0.75
CASC9-201ENST00000504531 ZNF609O15014 1411 aa10.33□□□□□ -0.76
CASC9-201ENST00000504531 RNF113AO15541 343 aaKnown RBP10.33□□□□□ -0.76
CASC9-201ENST00000504531 STAU1O95793 577 aaKnown RBP10.33□□□□□ -0.76
CASC9-201ENST00000504531 RHOQP17081 205 aa10.33□□□□□ -0.76
CASC9-201ENST00000504531 SMTNP53814 917 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms