RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 TRDNQ13061 729 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 E2F5Q15329 346 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 TNNI3KQ59H18 835 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 HPS5Q9UPZ3 1129 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 FPGT-TNNI3KV9GXZ4 949 aa16.01■□□□□ 0.15
COL6A4P2-202ENST00000504443 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 CPLX1O14810 134 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 MEFVO15553 781 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 MFAP3LO75121 409 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 RXRAP19793 462 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 TUBB4BP68371 445 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 PREPLQ4J6C6 727 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 PALLDQ8WX93 1383 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 A0A1B0GTH6 734 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 GOLGA8BA8MQT2 603 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 IRF6O14896 467 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 TUBBP07437 444 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 RPSAP08865 295 aaKnown RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 HSPD1P10809 573 aaKnown RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 PTPAQ15257 358 aa16■□□□□ 0.15
COL6A4P2-202ENST00000504443 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 A1CFQ9NQ94 594 aaKnown RBP16■□□□□ 0.15
COL6A4P2-202ENST00000504443 GYPCP04921 128 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 CASP1P29466 404 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 RESP18Q5W5W9 173 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 TMED8Q6PL24 325 aaPredicted RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 ENOX1Q8TC92 643 aaKnown RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 HDAC7Q8WUI4 952 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 SERTAD1Q9UHV2 236 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 TTF2Q9UNY4 1162 aaKnown RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 C2orf54Q08AI8 447 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 SMYD4Q8IYR2 804 aaPredicted RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 CHP1Q99653 195 aa15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 DDX20Q9UHI6 824 aaKnown RBP15.99■□□□□ 0.15
COL6A4P2-202ENST00000504443 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 FSBPO95073 299 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 HOXC9P31274 260 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CEP85LQ5SZL2 805 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 VPS37DQ86XT2 251 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 SCLT1Q96NL6 688 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 PLEKHG3A1L390 1219 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 SEC24CP53992 1094 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CLNS1AP54105 237 aaKnown RBP15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 IFT88Q13099 833 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 POSTNQ15063 836 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 TTMPQ5BVD1 217 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 APTXQ7Z2E3 356 aaKnown RBP15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 AMOTL1Q8IY63 956 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 LINS1Q8NG48 757 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CAGE1Q8TC20 777 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 SH3GL2Q99962 352 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 MYO1BO43795 1136 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CCNHP51946 323 aaPredicted RBP15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 SLC7A5Q01650 507 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 MPRIPQ6WCQ1 1025 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 MAP3K14Q99558 947 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 HAUS7Q99871 368 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 NWD1Q149M9 1564 aa15.98■□□□□ 0.15
COL6A4P2-202ENST00000504443 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 APBA1Q02410 837 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 B4GALNT4Q76KP1 1039 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 KBTBD3Q8NAB2 608 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 NAA15Q9BXJ9 866 aaKnown RBP15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 CCDC13Q8IYE1 715 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 SLC40A1Q9NP59 571 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 WWC3Q9ULE0 1092 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 SAR1BQ9Y6B6 198 aa15.97■□□□□ 0.15
COL6A4P2-202ENST00000504443 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 INHBEP58166 350 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 TSEN2Q8NCE0 465 aaKnown RBP15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 REXO2Q9Y3B8 237 aaKnown RBP15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 NAA25Q14CX7 972 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 TTC39AQ5SRH9 613 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 PHKBQ93100 1093 aa15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
COL6A4P2-202ENST00000504443 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms