RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 ZNF165P49910 485 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 C16orf45Q96MC5 204 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ALDH8A1Q9H2A2 487 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 KIAA1522Q9P206 1035 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 KDM6AO15550 1401 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 EP400Q96L91 3159 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 IGSF3O75054 1194 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PHKG2P15735 406 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 FGD1P98174 961 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MCMDC2Q4G0Z9 681 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TTLL5Q6EMB2 1281 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 OTUD7BQ6GQQ9 843 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 GIPC2Q8TF65 315 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CACTINQ8WUQ7 758 aaKnown RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 RAPGEF4Q8WZA2 1011 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TMPRSS4Q9NRS4 437 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 HMG20BQ9P0W2 317 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PRDM4Q9UKN5 801 aa7.7□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CAMTA1Q9Y6Y1 1673 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ECM1Q16610 540 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 LRRC24Q50LG9 513 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ZSCAN25Q6NSZ9 544 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 RBM43Q6ZSC3 357 aaKnown RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 RAB11FIP4Q86YS3 637 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 HAUS7Q99871 368 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CCDC94Q9BW85 323 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 DDX19AQ9NUU7 478 aaKnown RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CYP27B1O15528 508 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CASP7P55210 303 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TTLL7Q6ZT98 887 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 NPAS4Q8IUM7 802 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CCAR1Q8IX12 1150 aaKnown RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 NSUN7Q8NE18 718 aaKnown RBP7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 USP28Q96RU2 1077 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 GJB4Q9NTQ9 266 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CLIP2Q9UDT6 1046 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 NCAPD2Q15021 1401 aa7.69□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SPATA31A6Q5VVP1 1343 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 USP27XA6NNY8 438 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 GOLGA6L6A8MZA4 724 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 C21orf2O43822 256 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 FSHRP23945 695 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SCNN1DP51172 638 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 IQCB1Q15051 598 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ATG9AQ7Z3C6 839 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TNS4Q8IZW8 715 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TDRD7Q8NHU6 1098 aaKnown RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PUS3Q9BZE2 481 aaKnown RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PTPDC1A2A3K4 754 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PFKFB2O60825 505 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SNRPA1P09661 255 aaKnown RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 U2AF2P26368 475 aaKnown RBP eCLIP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MAPK1P28482 360 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ERVK-9P63128 1117 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 FOXO4P98177 505 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SNW1Q13573 536 aaKnown RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 KRT32Q14532 448 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 RABL6Q3YEC7 729 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 KBTBD3Q8NAB2 608 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SMARCC2Q8TAQ2 1214 aa7.68□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 C5P01031 1676 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 E7EWF7 191 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 M0R2C6 588 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 M0R2N6 131 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TATP17735 454 aaPredicted RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 HAND2P61296 217 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MTERF4Q7Z6M4 381 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CCDC125Q86Z20 511 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TTC5Q8N0Z6 440 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 EHBP1Q8NDI1 1231 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 A1BGP04217 495 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 HSPD1P10809 573 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TNNT1P13805 278 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 EXOSC10Q01780 885 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TAGLNQ01995 201 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 FKBP4Q02790 459 aaKnown RBP eCLIP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SCG3Q8WXD2 468 aaKnown RBP7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PAG1Q9NWQ8 432 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 RCOR1Q9UKL0 485 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 MEGF6O75095 1541 aa7.66□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 TPM3P06753 285 aa7.66□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 FDPSP14324 419 aaKnown RBP7.66□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 PDIA3P30101 505 aaKnown RBP7.66□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 GDF10P55107 478 aa7.66□□□□□ -1.18
NPHP3-AS1-202ENST00000504440 CC2D2BQ6DHV5 1058 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms