RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 SRRDQ9UH36 339 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 PLXNB2O15031 1838 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 ASNSP08243 561 aa16.99■□□□□ 0.31
PDLIM7-211ENST00000504318 SHMT1P34896 483 aa16.99■□□□□ 0.31
PDLIM7-211ENST00000504318 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-211ENST00000504318 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
PDLIM7-211ENST00000504318 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
PDLIM7-211ENST00000504318 MAGEB6P1A0A0J9YX57 407 aa16.98■□□□□ 0.31
PDLIM7-211ENST00000504318 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
PDLIM7-211ENST00000504318 BACE1P56817 501 aa16.98■□□□□ 0.31
PDLIM7-211ENST00000504318 DCP1AQ9NPI6 582 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-211ENST00000504318 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 USP5P45974 858 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 PRMT2P55345 433 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 MTMR2Q13614 643 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 SDR42E1Q8WUS8 393 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 GABRQQ9UN88 632 aa16.97■□□□□ 0.31
PDLIM7-211ENST00000504318 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 PRKCZQ05513 592 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 KIF22Q14807 665 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 SH3TC2Q8TF17 1288 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 AS3MTQ9HBK9 375 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 EMILIN3Q9NT22 766 aa16.96■□□□□ 0.31
PDLIM7-211ENST00000504318 MYH8P13535 1937 aa16.96■□□□□ 0.3
PDLIM7-211ENST00000504318 RLFQ13129 1914 aa16.96■□□□□ 0.3
PDLIM7-211ENST00000504318 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.3
PDLIM7-211ENST00000504318 PRKAB2O43741 272 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 GH2P01242 217 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 EN2P19622 333 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 UBE3CQ15386 1083 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 MYPNQ86TC9 1320 aa16.95■□□□□ 0.3
PDLIM7-211ENST00000504318 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 C19orf81C9J6K1 198 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 CYP2D6P10635 497 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 TSHZ3Q63HK5 1081 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 CRNKL1Q9BZJ0 848 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 PUS7LQ9H0K6 701 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 ECHDC1Q9NTX5 307 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
PDLIM7-211ENST00000504318 USP17L10C9JJH3 530 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 MBD4O95243 580 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 FCGRTP55899 365 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 MTFR1Q15390 333 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 OTUD7AQ8TE49 926 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 TXNRD2Q9NNW7 524 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
PDLIM7-211ENST00000504318 PARP14Q460N5 1801 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 PEX10O60683 326 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 SHISA4Q96DD7 197 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 CRBNQ96SW2 442 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 P2RX7Q99572 595 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 MCM9Q9NXL9 1143 aa16.92■□□□□ 0.3
PDLIM7-211ENST00000504318 HOXD10P28358 340 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 GRK4P32298 578 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 GCLCP48506 637 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 FLT3LGP49771 235 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 IRF5Q13568 498 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 GJD2Q9UKL4 321 aa16.91■□□□□ 0.3
PDLIM7-211ENST00000504318 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 CYP2D7A0A087X1C5 515 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 A0A1W2PRG0 241 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 PABPC4Q13310 644 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 ABCB5Q2M3G0 1257 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 C12orf60Q5U649 245 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 DYNLL2Q96FJ2 89 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.35e-11■■■□□ 17
PDLIM7-211ENST00000504318 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
PDLIM7-211ENST00000504318 CNMDO75829 334 aa16.89■□□□□ 0.29
PDLIM7-211ENST00000504318 HERVK_113P62684 666 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms