RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 NEK4P51957 841 aa16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 TFAP4Q01664 338 aa16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 EXOSC10Q01780 885 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
CYSTM1-202ENST00000504227 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 CPA1P15085 419 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 FGD1P98174 961 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
CYSTM1-202ENST00000504227 ERICH2A1L162 156 aa16.31■□□□□ 0.2
CYSTM1-202ENST00000504227 KIF3CO14782 793 aa16.31■□□□□ 0.2
CYSTM1-202ENST00000504227 AKR1B1P15121 316 aa16.31■□□□□ 0.2
CYSTM1-202ENST00000504227 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
CYSTM1-202ENST00000504227 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
CYSTM1-202ENST00000504227 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 TRAF5O00463 557 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 ST18O60284 1047 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 CAP2P40123 477 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 ANTXR2P58335 489 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 PRKG1Q13976 671 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 MTA3Q9BTC8 594 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 GINM1Q9NU53 330 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
CYSTM1-202ENST00000504227 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 GDF11O95390 407 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 IREB2P48200 963 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ARMC9Q7Z3E5 817 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ZNF784Q8NCA9 323 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
CYSTM1-202ENST00000504227 ITGBL1O95965 494 aaPredicted RBP16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 GH2P01242 217 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 ASNSP08243 561 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 MAP3K9P80192 1104 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 Q6ZUG5 572 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
CYSTM1-202ENST00000504227 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 NMT2O60551 498 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 TOMM70O94826 608 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 INPP5BP32019 993 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 WTAPQ15007 396 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 RAB3GAP1Q15042 981 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 RBM46Q8TBY0 533 aaKnown RBP16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 TTC14Q96N46 770 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 FZD1Q9UP38 647 aa16.27■□□□□ 0.2
CYSTM1-202ENST00000504227 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 TNKSO95271 1327 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 AK2P54819 239 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 FKBP1BP68106 108 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 FMR1Q06787 632 aaKnown RBP eCLIP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 SEPT2Q15019 361 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 C2orf69Q8N8R5 385 aa16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 ENAHQ8N8S7 591 aaPredicted RBP16.26■□□□□ 0.19
CYSTM1-202ENST00000504227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.193e-7■■■■■ 45.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms