RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 FESP07332 822 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 HARSP12081 509 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 EPS15P42566 896 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PTPN5P54829 565 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 POSTNQ15063 836 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PDCD2Q16342 344 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 BCL2A1Q16548 175 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 GALNT17Q6IS24 598 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 GIMAP6Q6P9H5 292 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CATIPQ7Z7H3 387 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 MYOCDQ8IZQ8 938 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 SPDYE1Q8NFV5 336 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 GTF3C6Q969F1 213 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 ZCWPW1Q9H0M4 648 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CD248Q9HCU0 757 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 SLC39A2Q9NP94 309 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PDRG1Q9NUG6 133 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 HESX1Q9UBX0 185 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF521Q96K83 1311 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 DCAF8L1A6NGE4 600 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 MBD4O95243 580 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 SCG2P13521 617 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 RARSP54136 660 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PTPN14Q15678 1187 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 LRRFIP1Q32MZ4 808 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 ODF2Q5BJF6 829 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 BEND6Q5SZJ8 279 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 POTEAQ6S8J7 498 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 DBX2Q6ZNG2 339 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 TRMT1LQ7Z2T5 733 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PPFIBP1Q86W92 1011 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 IFT43Q96FT9 208 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 UBA5Q9GZZ9 404 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC8Q9H0W5 538 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PCMTD2Q9NV79 361 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 HDAC6Q9UBN7 1215 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 INSRP06213 1382 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 NUP188Q5SRE5 1749 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PKD1L3Q7Z443 1732 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 OVOS2A0A0J9YW53 1432 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 BCL9O00512 1426 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 OVOS2Q6IE36 1432 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 ANKRD62A6NC57 917 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 A6NHS1 94 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 GCP02774 474 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CALRP27797 417 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PRPHP41219 470 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PPARDQ03181 441 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 KCNB1Q14721 858 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 FILIP1LQ4L180 1135 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 EMC10Q5UCC4 262 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF772Q68DY9 489 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 MIS18BP1Q6P0N0 1132 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CTCFLQ8NI51 663 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 SH3TC2Q8TF17 1288 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 RNF25Q96BH1 459 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 RBM41Q96IZ5 413 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 TMX3Q96JJ7 454 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 CCDC43Q96MW1 224 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 DEF6Q9H4E7 631 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 LNPEPQ9UIQ6 1025 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 PHF24Q9UPV7 400 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 EFR3BQ9Y2G0 817 aa4.17□□□□□ -1.74
PCDH11X-208ENST00000504220 NHSQ6T4R5 1651 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TMEM110-MUSTN1A8MSY1 372 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 SMNDC1O75940 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ADCY5O95622 1261 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ANXA1P04083 346 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 GLULP15104 373 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 VARSP26640 1264 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 MCM2P49736 904 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 PAK2Q13177 524 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 MAP3K11Q16584 847 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 LRSAM1Q6UWE0 723 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 MYO1HQ8N1T3 1032 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF397Q8NF99 534 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TRAIPQ9BWF2 469 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 OSBPL5Q9H0X9 879 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 DIS3Q9Y2L1 958 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 PCDHB15Q9Y5E8 787 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 LRP5O75197 1615 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 MYH7P12883 1935 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 USP27XA6NNY8 438 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 MAP2K7O14733 419 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 RASSF9O75901 435 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 SASH1O94885 1247 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 BAG4O95429 457 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 KCNA2P16389 499 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 PDE6BP35913 854 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TMPOP42166 694 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TADA2BQ86TJ2 420 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 TRIM6Q9C030 488 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 SRCIN1Q9C0H9 1055 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 FAM107BQ9H098 131 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 L2HGDHQ9H9P8 463 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 BTG4Q9NY30 223 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ADAM21Q9UKJ8 722 aa4.16□□□□□ -1.74
PCDH11X-208ENST00000504220 ZNF215Q9UL58 517 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms