RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 JAK2O60674 1132 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 ZNF274Q96GC6 653 aaPredicted RBP18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 SYNMO15061 1565 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 KDRP35968 1356 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 ACTN4O43707 911 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 SLC1A4P43007 532 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 DNAJC21Q5F1R6 531 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 NDUFB9Q9Y6M9 179 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 ALDH3A1P30838 453 aa18.44■□□□□ 0.54
PCDHA1-203ENST00000504120 MICALL1Q8N3F8 863 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 FAM169AQ9Y6X4 670 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 SETDB1Q15047 1291 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 PICK1Q9NRD5 415 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 DNM3Q9UQ16 869 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 ARL1P40616 181 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 NCAPH2Q6IBW4 605 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 PLEKHG1Q9ULL1 1385 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 LTKP29376 864 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 INF2Q27J81 1249 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 HERC4Q5GLZ8 1057 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 LIN9Q5TKA1 542 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 UBL4BQ8N7F7 174 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 TBC1D22AQ8WUA7 517 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 TERF1P54274 439 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 CALCRLQ16602 461 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 ME3Q16798 604 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 IQCDQ96DY2 449 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 NKIRAS1Q9NYS0 192 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 KCNJ14Q9UNX9 436 aa18.43■□□□□ 0.54
PCDHA1-203ENST00000504120 LMTK3Q96Q04 1460 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 GIGYF1O75420 1035 aaPredicted RBP18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 KRT9P35527 623 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 DPP8Q6V1X1 898 aaPredicted RBP18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 CCDC84Q86UT8 332 aaPredicted RBP18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 CABP7Q86V35 215 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 ERCC5P28715 1186 aaPredicted RBP18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 STRN3Q13033 797 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 ADALQ6DHV7 355 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 NDC80O14777 642 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 TAB2Q9NYJ8 693 aa18.42■□□□□ 0.54
PCDHA1-203ENST00000504120 PPARAQ07869 468 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 RAB3IL1Q8TBN0 382 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 NELFBQ8WX92 580 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 MYSM1Q5VVJ2 828 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 IFT20Q8IY31 132 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 TFAP4Q01664 338 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 FAM135BQ49AJ0 1406 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 SERPINA10Q9UK55 444 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 UTP11Q9Y3A2 253 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 RIOK3O14730 519 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 CTSWP56202 376 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 UTP14CQ5TAP6 766 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 GPATCH11Q8N954 259 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 CARD6Q9BX69 1037 aa18.41■□□□□ 0.54
PCDHA1-203ENST00000504120 NUCKS1Q9H1E3 243 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 AGTPBP1Q9UPW5 1226 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 KIF1BO60333 1816 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 MAGEA1P43355 309 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 TSKSQ9UJT2 592 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 A6NNZ2 444 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 HARSP12081 509 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 TUBB8Q3ZCM7 444 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 AFAP1L1Q8TED9 768 aa18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHA1-203ENST00000504120 TET3O43151 1660 aa18.39■□□□□ 0.54
PCDHA1-203ENST00000504120 SLC8A3P57103 927 aa18.39■□□□□ 0.54
PCDHA1-203ENST00000504120 CLUL1Q15846 466 aa18.39■□□□□ 0.54
PCDHA1-203ENST00000504120 HOOK2Q96ED9 719 aa18.39■□□□□ 0.54
PCDHA1-203ENST00000504120 ATP7BP35670 1465 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 AATKQ6ZMQ8 1374 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 TRPC3Q13507 836 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 MAPKAPK5Q8IW41 473 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 SUPT20HQ8NEM7 779 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 TRIM7Q9C029 511 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 CA8P35219 290 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 DYMQ7RTS9 669 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 NT5C3AQ9H0P0 336 aa18.39■□□□□ 0.53
PCDHA1-203ENST00000504120 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 FLOT1O75955 427 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 CCDC51Q96ER9 411 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
PCDHA1-203ENST00000504120 STK32BQ9NY57 414 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms