RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 USP17L10C9JJH3 530 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 OSBPP22059 807 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 MOGSQ13724 837 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 ABCB5Q2M3G0 1257 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 GPAT2Q6NUI2 795 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 FSD1Q9BTV5 496 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 HPS5Q9UPZ3 1129 aa21.53■■□□□ 1.04
NFKB1-204ENST00000504044 HOXD10P28358 340 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 HMGCS2P54868 508 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 PRMT2P55345 433 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 BACE1P56817 501 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 SH3D19Q5HYK7 790 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 C17orf99Q6UX52 265 aa21.52■■□□□ 1.04
NFKB1-204ENST00000504044 CCDC84Q86UT8 332 aaPredicted RBP21.52■■□□□ 1.04
NFKB1-204ENST00000504044 GH2P01242 217 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 PLCD1P51178 756 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 USP14P54578 494 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 LACTBP83111 547 aaPredicted RBP21.51■■□□□ 1.03
NFKB1-204ENST00000504044 MTMR2Q13614 643 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 PI4K2BQ8TCG2 481 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 FEZ1Q99689 392 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 PUS7LQ9H0K6 701 aaKnown RBP21.51■■□□□ 1.03
NFKB1-204ENST00000504044 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.51■■□□□ 1.03
NFKB1-204ENST00000504044 ARPP21Q9UBL0 812 aaPredicted RBP21.51■■□□□ 1.03
NFKB1-204ENST00000504044 CPA4Q9UI42 421 aa21.51■■□□□ 1.03
NFKB1-204ENST00000504044 MYO5AQ9Y4I1 1855 aaKnown RBP21.5■■□□□ 1.03
NFKB1-204ENST00000504044 RRP1BQ14684 758 aaKnown RBP21.5■■□□□ 1.03
NFKB1-204ENST00000504044 RAB3GAP1Q15042 981 aa21.5■■□□□ 1.03
NFKB1-204ENST00000504044 GIMAP6Q6P9H5 292 aa21.5■■□□□ 1.03
NFKB1-204ENST00000504044 SMC5Q8IY18 1101 aa21.5■■□□□ 1.03
NFKB1-204ENST00000504044 EVI5LQ96CN4 794 aa21.5■■□□□ 1.03
NFKB1-204ENST00000504044 FOCADQ5VW36 1801 aa21.5■■□□□ 1.03
NFKB1-204ENST00000504044 MPHOSPH10O00566 681 aaKnown RBP21.49■■□□□ 1.03
NFKB1-204ENST00000504044 CYP2C8P10632 490 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 GCLCP48506 637 aaPredicted RBP21.49■■□□□ 1.03
NFKB1-204ENST00000504044 IRX3P78415 501 aaPredicted RBP21.49■■□□□ 1.03
NFKB1-204ENST00000504044 USP17L2Q6R6M4 530 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 TICAM2Q86XR7 235 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 NACAP1Q9BZK3 213 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 STAP2Q9UGK3 403 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 PTPN22Q9Y2R2 807 aa21.49■■□□□ 1.03
NFKB1-204ENST00000504044 PRKAB2O43741 272 aa21.48■■□□□ 1.03
NFKB1-204ENST00000504044 FCGRTP55899 365 aa21.48■■□□□ 1.03
NFKB1-204ENST00000504044 GABPAQ06546 454 aa21.48■■□□□ 1.03
NFKB1-204ENST00000504044 OTUD7AQ8TE49 926 aaPredicted RBP21.48■■□□□ 1.03
NFKB1-204ENST00000504044 GTF3C2Q8WUA4 911 aaPredicted RBP21.48■■□□□ 1.03
NFKB1-204ENST00000504044 CCDC17Q96LX7 622 aa21.48■■□□□ 1.03
NFKB1-204ENST00000504044 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
NFKB1-204ENST00000504044 ZNF287Q9HBT7 754 aa21.48■■□□□ 1.03
NFKB1-204ENST00000504044 USP17L12C9JPN9 530 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 USP17L21D6R901 530 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 FMNL1O95466 1100 aaPredicted RBP21.47■■□□□ 1.03
NFKB1-204ENST00000504044 APPP05067 770 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 SHMT1P34896 483 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 PDE1AP54750 535 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 SLFNL1Q499Z3 407 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 TMEM179Q6ZVK1 233 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 NBPF11Q86T75 865 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 LNPKQ9C0E8 428 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 ADGRA2Q96PE1 1338 aa21.47■■□□□ 1.03
NFKB1-204ENST00000504044 GPAA1O43292 621 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 PSMC4P43686 418 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 TDO2P48775 406 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 TREML2Q5T2D2 321 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 C12orf60Q5U649 245 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 B4GALNT3Q6L9W6 998 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 CHD1LQ86WJ1 897 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 OSBP2Q969R2 916 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 SH2D4AQ9H788 454 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 SALL3Q9BXA9 1300 aa21.46■■□□□ 1.03
NFKB1-204ENST00000504044 BCRP11274 1271 aa21.45■■□□□ 1.02
NFKB1-204ENST00000504044 HOXA7P31268 230 aaPredicted RBP21.44■■□□□ 1.02
NFKB1-204ENST00000504044 NUCB1Q02818 461 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 C16orf86Q6ZW13 317 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 KIAA1683Q9H0B3 1180 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 ARHGEF10LQ9HCE6 1279 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 MYH1P12882 1939 aa21.44■■□□□ 1.02
NFKB1-204ENST00000504044 NAV1Q8NEY1 1877 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 CDK5RAP2Q96SN8 1893 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 TRIM6-TRIM34B2RNG4 842 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 PATL2C9JE40 543 aaKnown RBP21.43■■□□□ 1.02
NFKB1-204ENST00000504044 CHGBP05060 677 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
NFKB1-204ENST00000504044 CYP2D6P10635 497 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 JAG1P78504 1218 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 SLC9C1Q4G0N8 1177 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 C12orf42Q96LP6 360 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
NFKB1-204ENST00000504044 SIPA1L1O43166 1804 aa21.43■■□□□ 1.02
NFKB1-204ENST00000504044 IGHDP01880 384 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 CDK8P49336 464 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 ZMYM1Q5SVZ6 1142 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 ANKRD13CQ8N6S4 541 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 RAET1EQ8TD07 263 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 DYNLL2Q96FJ2 89 aa21.42■■□□□ 1.02
NFKB1-204ENST00000504044 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms