RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ASNSP08243 561 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 FOSL2P15408 326 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 ADORA1P30542 326 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 IL15P40933 162 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 MFSD14CQ5VZR4 134 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 MRPL50Q8N5N7 158 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 PAGR1Q9BTK6 254 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 PORCNQ9H237 461 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 RLFQ13129 1914 aa19.61■□□□□ 0.73
PDLIM7-210ENST00000503827 EYSQ5T1H1 3165 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 GLRX3O76003 335 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 COL9A1P20849 921 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 RTP1P59025 263 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 GSTO1P78417 241 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 SMAD3P84022 425 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 MAP2K5Q13163 448 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 LPAR1Q92633 364 aa19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 EDC3Q96F86 508 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 DDX20Q9UHI6 824 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-210ENST00000503827 DNAH12Q6ZR08 3092 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 DNM1LO00429 736 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 CNGA1P29973 690 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 PI4KBQ9UBF8 816 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 ATP11BQ9Y2G3 1177 aa19.59■□□□□ 0.73
PDLIM7-210ENST00000503827 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.73
PDLIM7-210ENST00000503827 SIPA1L1O43166 1804 aa19.58■□□□□ 0.73
PDLIM7-210ENST00000503827 TIMM10P62072 90 aa19.58■□□□□ 0.72
PDLIM7-210ENST00000503827 C9orf50Q5SZB4 431 aa19.58■□□□□ 0.72
PDLIM7-210ENST00000503827 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-210ENST00000503827 CCNA1P78396 465 aa19.57■□□□□ 0.72
PDLIM7-210ENST00000503827 TEX11Q8IYF3 940 aa19.57■□□□□ 0.72
PDLIM7-210ENST00000503827 ZNF384Q8TF68 577 aa19.57■□□□□ 0.72
PDLIM7-210ENST00000503827 UBTFL1P0CB47 393 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-210ENST00000503827 ATP2B2Q01814 1243 aa19.56■□□□□ 0.72
PDLIM7-210ENST00000503827 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
PDLIM7-210ENST00000503827 PRDM5Q9NQX1 630 aaPredicted RBP19.56■□□□□ 0.72
PDLIM7-210ENST00000503827 GINM1Q9NU53 330 aa19.56■□□□□ 0.72
PDLIM7-210ENST00000503827 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 WDR78Q5VTH9 848 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 SLC39A5Q6ZMH5 540 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 BADQ92934 168 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 NSUN4Q96CB9 384 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 FLRT1Q9NZU1 646 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 RABGAP1Q9Y3P9 1069 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 PRUNE2Q8WUY3 3088 aa19.55■□□□□ 0.72
PDLIM7-210ENST00000503827 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 TMEM265A0A087WTH1 108 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 SLC15A5A6NIM6 579 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 XAGE2Q96GT9 111 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 AKAP2Q9Y2D5 859 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 NDUFB9Q9Y6M9 179 aa19.54■□□□□ 0.72
PDLIM7-210ENST00000503827 A0A1B0GUL7 405 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 KBTBD13C9JR72 458 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 PTPREP23469 700 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 JAG1P78504 1218 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 GJC2Q5T442 439 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 FOXP4Q8IVH2 680 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 CRACR2BQ8N4Y2 399 aaPredicted RBP19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 HDAC5Q9UQL6 1122 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 IVNS1ABPQ9Y6Y0 642 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
PDLIM7-210ENST00000503827 GDF11O95390 407 aa19.52■□□□□ 0.72
PDLIM7-210ENST00000503827 POTEEQ6S8J3 1075 aa19.52■□□□□ 0.72
PDLIM7-210ENST00000503827 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
PDLIM7-210ENST00000503827 HMG20BQ9P0W2 317 aa19.52■□□□□ 0.72
PDLIM7-210ENST00000503827 ZBTB21Q9ULJ3 1066 aa19.52■□□□□ 0.72
PDLIM7-210ENST00000503827 TTC28Q96AY4 2481 aa19.51■□□□□ 0.71
PDLIM7-210ENST00000503827 HOXC6P09630 235 aa19.51■□□□□ 0.71
PDLIM7-210ENST00000503827 CYP2C19P33261 490 aa19.51■□□□□ 0.71
PDLIM7-210ENST00000503827 TBC1D9Q6ZT07 1266 aa19.51■□□□□ 0.71
PDLIM7-210ENST00000503827 SPATA5Q8NB90 893 aa19.51■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L15C9J2P7 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L13C9JLJ4 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L11C9JVI0 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L18D6R9N7 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L22D6RA61 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L17D6RBQ6 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L19D6RCP7 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L20D6RJB6 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 CNMDO75829 334 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 BAG3O95817 575 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 USP17L24Q0WX57 530 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 SHROOM1Q2M3G4 852 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 TRIM60Q495X7 471 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 NPLOC4Q8TAT6 608 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
PDLIM7-210ENST00000503827 NEUROD6Q96NK8 337 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms