RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 RBM28Q9NW13 759 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 ZNF70Q9UC06 446 aaPredicted RBP9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 ZBTB12Q9Y330 459 aaPredicted RBP9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 TACC3Q9Y6A5 838 aa9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 FOCADQ5VW36 1801 aa9.51□□□□□ -0.89
TOPBP1-202ENST00000503338 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 GOLGA8AA7E2F4 631 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 GRIN3BO60391 1043 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 PRDM1O75626 825 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 RASA1P20936 1047 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 TFAP4Q01664 338 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 ZSCAN29Q8IWY8 852 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 GPC2Q8N158 579 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 STK11IPQ8N1F8 1099 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 ENAHQ8N8S7 591 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 NECAB1Q8N987 351 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 SMARCC2Q8TAQ2 1214 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 FAM151AQ8WW52 585 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 WASF1Q92558 559 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 ZBED3Q96IU2 234 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 INCENPQ9NQS7 918 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 DDX60LQ5H9U9 1706 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-202ENST00000503338 MYH1P12882 1939 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 STX6O43752 255 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 BRD1O95696 1058 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 KIF5BP33176 963 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 GMPSP49915 693 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 GNAQP50148 359 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 NFIAQ12857 509 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 RTN1Q16799 776 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 LARP1BQ659C4 914 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 CLEC17AQ6ZS10 378 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 MICU3Q86XE3 530 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 HOOK2Q96ED9 719 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 DYNLL2Q96FJ2 89 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 KAT14Q9H8E8 782 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 CNOT7Q9UIV1 285 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
TOPBP1-202ENST00000503338 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 WNT10BO00744 389 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 TBC1D12O60347 775 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 TCP10Q12799 353 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 FAM47AQ5JRC9 791 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 FANCBQ8NB91 859 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 CTCFLQ8NI51 663 aaPredicted RBP9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 ZKSCAN3Q9BRR0 538 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 GPHNQ9NQX3 736 aaPredicted RBP9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 CDK5RAP2Q96SN8 1893 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 STK36Q9NRP7 1315 aa9.48□□□□□ -0.89
TOPBP1-202ENST00000503338 ECM29Q5VYK3 1845 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 H3BQV1 296 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 ZSCAN22P10073 491 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 TOP1P11387 765 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 IFNAR1P17181 557 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 SYT1P21579 422 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 NOVP48745 357 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 PRELPP51888 382 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 SSRP1Q08945 709 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 KIF4BQ2VIQ3 1234 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 SLC4A8Q2Y0W8 1093 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 CERKLQ49MI3 558 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 TATDN1Q6P1N9 297 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 SLC44A5Q8NCS7 719 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 TNPO1Q92973 898 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 LZTS2Q9BRK4 669 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 VEZTQ9HBM0 779 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 CABP5Q9NP86 173 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 GPRC5DQ9NZD1 345 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 RNF181Q9P0P0 153 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 PCDHAC2Q9Y5I4 1007 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 PPP2R3BQ9Y5P8 575 aa9.47□□□□□ -0.89
TOPBP1-202ENST00000503338 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.89
TOPBP1-202ENST00000503338 CLRN2A0PK11 232 aa9.46□□□□□ -0.9
TOPBP1-202ENST00000503338 DDTLA6NHG4 134 aaPredicted RBP9.46□□□□□ -0.9
TOPBP1-202ENST00000503338 TCP10L2B9ZVM9 353 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms