RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
EXOSC9-203ENST00000503139 SLFN12Q8IYM2 578 aa12.22□□□□□ -0.45
EXOSC9-203ENST00000503139 UPK3BL1B0FP48 263 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 UPK3BL2E5RIL1 263 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 CAP2P40123 477 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 ASPAP45381 313 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 SLC6A19Q695T7 634 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 SLC9A7Q96T83 725 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
EXOSC9-203ENST00000503139 SLBPQ14493 270 aaKnown RBP eCLIP12.2□□□□□ -0.46
EXOSC9-203ENST00000503139 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
EXOSC9-203ENST00000503139 KCT2Q8NC54 265 aa12.2□□□□□ -0.46
EXOSC9-203ENST00000503139 FAM13CQ8NE31 585 aa12.2□□□□□ -0.46
EXOSC9-203ENST00000503139 USP21Q9UK80 565 aa12.2□□□□□ -0.46
EXOSC9-203ENST00000503139 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 FXNQ16595 210 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 UNC5AQ6ZN44 842 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 SCARF2Q96GP6 870 aaPredicted RBP12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 DEPDC7Q96QD5 511 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 SRPK1Q96SB4 655 aaKnown RBP12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 PIDD1Q9HB75 910 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 SLC12A7Q9Y666 1083 aa12.19□□□□□ -0.46
EXOSC9-203ENST00000503139 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 FAM221BA6H8Z2 402 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 C9orf172C9J069 976 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 NOS3P29474 1203 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 FAM177A1Q8N128 213 aaPredicted RBP12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 NACC1Q96RE7 527 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 CEP41Q9BYV8 373 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 CCDC113Q9H0I3 377 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 ACSS3Q9H6R3 686 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
EXOSC9-203ENST00000503139 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 RAG1P15918 1043 aa12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 INSM1Q01101 510 aaPredicted RBP12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 WFDC12Q8WWY7 111 aa12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 FAM46AQ96IP4 442 aaKnown RBP12.17□□□□□ -0.46
EXOSC9-203ENST00000503139 TLDC2A0PJX2 215 aa12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 ADGRE1Q14246 886 aa12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 MBTPS1Q14703 1052 aa12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 PRAMEF13Q5VWM6 474 aa12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 DPH2Q9BQC3 489 aaPredicted RBP12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 TMA7Q9Y2S6 64 aaKnown RBP12.16□□□□□ -0.46
EXOSC9-203ENST00000503139 RNGTTO60942 597 aaKnown RBP12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 GJB6O95452 261 aa12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 APBA3O96018 575 aa12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 CST3P01034 146 aaPredicted RBP12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 GLB1P16278 677 aa12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 JAZF1Q86VZ6 243 aa12.15□□□□□ -0.46
EXOSC9-203ENST00000503139 B2RBV5 119 aa12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 RGS13O14921 159 aa12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 CCNFP41002 786 aa12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 CDPF1Q6NVV7 123 aa12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 C6orf15Q6UXA7 325 aaPredicted RBP12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 PCOLCE2Q9UKZ9 415 aa12.14□□□□□ -0.47
EXOSC9-203ENST00000503139 RASGRF1Q13972 1273 aa12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 CYB5D2Q8WUJ1 264 aa12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 KIF2CQ99661 725 aa12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
EXOSC9-203ENST00000503139 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 PDPK1O15530 556 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 SART1O43290 800 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 UBOX5O94941 541 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 RAB6AP20340 208 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 MRM1Q6IN84 353 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 PHACTR4Q8IZ21 702 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 FOXQ1Q9C009 403 aa12.12□□□□□ -0.47
EXOSC9-203ENST00000503139 GAS2O43903 313 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 DDAH1O94760 285 aa12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 LRIG2O94898 1065 aa12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 EZH1Q92800 747 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 CCDC74BQ96LY2 380 aa12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 SSU72Q9NP77 194 aaKnown RBP12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 ZNF214Q9UL59 606 aaPredicted RBP12.11□□□□□ -0.47
EXOSC9-203ENST00000503139 USP11P51784 963 aa12.1□□□□□ -0.47
EXOSC9-203ENST00000503139 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms