RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 LRRC31Q6UY01 552 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 CCDC170Q8IYT3 715 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 NEK11Q8NG66 645 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 BICD2Q8TD16 824 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 LZICQ8WZA0 190 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 ARHGAP45Q92619 1136 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 RNF166Q96A37 237 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 ZBTB10Q96DT7 871 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 NAF1Q96HR8 494 aaKnown RBP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 MAP3K14Q99558 947 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 NAP1L4Q99733 375 aaKnown RBP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 MUC3BQ9H195 1237 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 DCAF16Q9NXF7 216 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 UBAP1Q9NZ09 502 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 CABP1Q9NZU7 370 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 CHPF2Q9P2E5 772 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-203ENST00000502998 USP19O94966 1318 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 CPDO75976 1380 aa7.41□□□□□ -1.22
CLCN3-203ENST00000502998 EME2A4GXA9 379 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 GOLGA6L9A6NEM1 432 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 GOLGA8AA7E2F4 631 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 TBKBP1A7MCY6 615 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 CHL1O00533 1208 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 ZBED4O75132 1171 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 ZNF189O75820 626 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 APBA3O96018 575 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 EVA1CP58658 441 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 IGBP1P78318 339 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 RCN1Q15293 331 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 GNPTABQ3T906 1256 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 Q4G0T1 1027 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 CCDC122Q5T0U0 273 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 ANKRD45Q5TZF3 282 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 CWF19L1Q69YN2 538 aaKnown RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 OLFML1Q6UWY5 402 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 KIAA0825Q8IV33 1275 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 PLPP6Q8IY26 295 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 CCDC146Q8IYE0 955 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 SLC43A3Q8NBI5 491 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 PARD3BQ8TEW8 1205 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 JARID2Q92833 1246 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 RNPC3Q96LT9 517 aaKnown RBP7.4□□□□□ -1.22
CLCN3-203ENST00000502998 TRIM4Q9C037 500 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 VCX3BQ9H321 246 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 TMEM165Q9HC07 324 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 SEPT10Q9P0V9 454 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 PTPRCP08575 1304 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 USP6P35125 1406 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 SSH2Q76I76 1423 aa7.4□□□□□ -1.22
CLCN3-203ENST00000502998 SLIT3O75094 1523 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 GOLGA6L10A0A0M3HER8 536 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 ATP6V1G1O75348 118 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 STAM2O75886 525 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 GCP02774 474 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 RPSAP08865 295 aaKnown RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CD53P19397 219 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 IL4RP24394 825 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 INPP5BP32019 993 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 COX10Q12887 443 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 BIRC3Q13489 604 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 KCTD2Q14681 263 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 MUM1Q2TAK8 710 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC144BQ3MJ40 725 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 SPDYCQ5MJ68 293 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 WLSQ5T9L3 541 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 IFFO2Q5TF58 517 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CEP135Q66GS9 1140 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 PTF1AQ7RTS3 328 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC144CPQ8IYA2 1237 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 MAB21L3Q8N8X9 362 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 LRRC45Q96CN5 670 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CDHR1Q96JP9 859 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CAPS2Q9BXY5 557 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CCDC68Q9H2F9 335 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 TAOK3Q9H2K8 898 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 KIF9Q9HAQ2 790 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 ARGLU1Q9NWB6 273 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 CROTQ9UKG9 612 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 TMED5Q9Y3A6 229 aa7.39□□□□□ -1.23
CLCN3-203ENST00000502998 ARIH1Q9Y4X5 557 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-203ENST00000502998 PIK3C2AO00443 1686 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 COL5A2P05997 1499 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-203ENST00000502998 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 TMEM232C9JQI7 657 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 KCNQ2O43526 872 aa7.38□□□□□ -1.23
CLCN3-203ENST00000502998 TBCAO75347 108 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms