RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PI4KBQ9UBF8 816 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 AGTPBP1Q9UPW5 1226 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
SNCA-207ENST00000502987 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
SNCA-207ENST00000502987 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
SNCA-207ENST00000502987 CCL5P13501 91 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 CAP2P40123 477 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 ZAP70P43403 619 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNCA-207ENST00000502987 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
SNCA-207ENST00000502987 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 HERC5Q9UII4 1024 aaKnown RBP13.11□□□□□ -0.31
SNCA-207ENST00000502987 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
SNCA-207ENST00000502987 ADCY3O60266 1144 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 IDH1O75874 414 aaKnown RBP13.1□□□□□ -0.31
SNCA-207ENST00000502987 RLBP1P12271 317 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 CYP7A1P22680 504 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 HMGCS2P54868 508 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
SNCA-207ENST00000502987 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 DPF3Q92784 378 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 COA7Q96BR5 231 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 TBC1D2Q9BYX2 928 aa13.1□□□□□ -0.31
SNCA-207ENST00000502987 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
SNCA-207ENST00000502987 USP5P45974 858 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 FLT3LGP49771 235 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 PPP4CP60510 307 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 PANK1Q8TE04 598 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 CDK5RAP2Q96SN8 1893 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 TMOD4Q9NZQ9 345 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
SNCA-207ENST00000502987 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
SNCA-207ENST00000502987 MYH1P12882 1939 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 ASNSP08243 561 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 ELNP15502 786 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
SNCA-207ENST00000502987 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.32
SNCA-207ENST00000502987 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 AACSQ86V21 672 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
SNCA-207ENST00000502987 ZNF512BQ96KM6 892 aaPredicted RBP13.08□□□□□ -0.32
SNCA-207ENST00000502987 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
SNCA-207ENST00000502987 COL2A1P02458 1487 aaPredicted RBP13.08□□□□□ -0.32
SNCA-207ENST00000502987 APBB1O00213 710 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 GDF11O95390 407 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 TFRCP02786 760 aaKnown RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 GJB1P08034 283 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 MS4A1P11836 297 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 MAP3K12Q12852 859 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 MIGA1Q8NAN2 632 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 UNC93B1Q9H1C4 597 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
SNCA-207ENST00000502987 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 FLT1P17948 1338 aa13.07□□□□□ -0.32
SNCA-207ENST00000502987 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 INHAP05111 366 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 GJA8P48165 433 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 MTMR2Q13614 643 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
SNCA-207ENST00000502987 WDR18Q9BV38 432 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
SNCA-207ENST00000502987 LOC285556D6RIA3 1793 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 H0YGN5 161 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 IGSF3O75054 1194 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 BACE1P56817 501 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 SH3D19Q5HYK7 790 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
SNCA-207ENST00000502987 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
SNCA-207ENST00000502987 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 DEFB118Q96PH6 123 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 HTATIP2Q9BUP3 242 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 ZBED9Q6R2W3 1325 aa13.05□□□□□ -0.32
SNCA-207ENST00000502987 CEP290O15078 2479 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 SIPA1L1O43166 1804 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms