RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 SLC4A8Q2Y0W8 1093 aa22.73■■□□□ 1.23
ECM1-207ENST00000498579 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
ECM1-207ENST00000498579 DCTPP1Q9H773 170 aa22.73■■□□□ 1.23
ECM1-207ENST00000498579 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
ECM1-207ENST00000498579 POTEFA5A3E0 1075 aa22.72■■□□□ 1.23
ECM1-207ENST00000498579 IRX3P78415 501 aaPredicted RBP22.72■■□□□ 1.23
ECM1-207ENST00000498579 ANKRD13CQ8N6S4 541 aa22.72■■□□□ 1.23
ECM1-207ENST00000498579 CABP5Q9NP86 173 aa22.72■■□□□ 1.23
ECM1-207ENST00000498579 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
ECM1-207ENST00000498579 TNPO2O14787 897 aaKnown RBP22.71■■□□□ 1.23
ECM1-207ENST00000498579 ECM2O94769 699 aaPredicted RBP22.71■■□□□ 1.23
ECM1-207ENST00000498579 HOXA7P31268 230 aaPredicted RBP22.71■■□□□ 1.23
ECM1-207ENST00000498579 GRK4P32298 578 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 ADD2P35612 726 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 UBE3CQ15386 1083 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 CERKLQ49MI3 558 aaPredicted RBP22.71■■□□□ 1.23
ECM1-207ENST00000498579 SLAIN1Q8ND83 568 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 SH3TC2Q8TF17 1288 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
ECM1-207ENST00000498579 GH2P01242 217 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 PRKCZQ05513 592 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 AMOTL1Q8IY63 956 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 GTF3C2Q8WUA4 911 aaPredicted RBP22.7■■□□□ 1.22
ECM1-207ENST00000498579 COA7Q96BR5 231 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 EDC3Q96F86 508 aaKnown RBP22.7■■□□□ 1.22
ECM1-207ENST00000498579 DDRGK1Q96HY6 314 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 ASCC2Q9H1I8 757 aaPredicted RBP22.7■■□□□ 1.22
ECM1-207ENST00000498579 ATP8A2Q9NTI2 1148 aa22.7■■□□□ 1.22
ECM1-207ENST00000498579 USP14P54578 494 aa22.69■■□□□ 1.22
ECM1-207ENST00000498579 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
ECM1-207ENST00000498579 UBXN2AP68543 259 aa22.69■■□□□ 1.22
ECM1-207ENST00000498579 ABCB5Q2M3G0 1257 aa22.69■■□□□ 1.22
ECM1-207ENST00000498579 USP17L2Q6R6M4 530 aa22.69■■□□□ 1.22
ECM1-207ENST00000498579 LCORLQ8N3X6 602 aa22.69■■□□□ 1.22
ECM1-207ENST00000498579 DCP1AQ9NPI6 582 aaPredicted RBP22.69■■□□□ 1.22
ECM1-207ENST00000498579 SMARCA5O60264 1052 aaPredicted RBP22.68■■□□□ 1.22
ECM1-207ENST00000498579 PLCD1P51178 756 aa22.68■■□□□ 1.22
ECM1-207ENST00000498579 JAG1P78504 1218 aa22.68■■□□□ 1.22
ECM1-207ENST00000498579 FEZ1Q99689 392 aa22.68■■□□□ 1.22
ECM1-207ENST00000498579 PHIPQ8WWQ0 1821 aa22.68■■□□□ 1.22
ECM1-207ENST00000498579 FOCADQ5VW36 1801 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 MBD4O95243 580 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 EN2P19622 333 aaPredicted RBP22.67■■□□□ 1.22
ECM1-207ENST00000498579 GABPAQ06546 454 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 IRF5Q13568 498 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 RAB3GAP1Q15042 981 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 PRPF38BQ5VTL8 546 aaKnown RBP22.67■■□□□ 1.22
ECM1-207ENST00000498579 NKX2-3Q8TAU0 364 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 SDR42E1Q8WUS8 393 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 BIN2Q9UBW5 565 aaPredicted RBP22.67■■□□□ 1.22
ECM1-207ENST00000498579 SWAP70Q9UH65 585 aa22.67■■□□□ 1.22
ECM1-207ENST00000498579 SIPA1L1O43166 1804 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 SHMT1P34896 483 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 FLT3LGP49771 235 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 PXYLP1Q8TE99 480 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 C12orf42Q96LP6 360 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 ARMT1Q9H993 441 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 MORF4L1Q9UBU8 362 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 CENPFP49454 3210 aa22.66■■□□□ 1.22
ECM1-207ENST00000498579 SHROOM1Q2M3G4 852 aaPredicted RBP22.65■■□□□ 1.22
ECM1-207ENST00000498579 LRRFIP1Q32MZ4 808 aaKnown RBP22.65■■□□□ 1.22
ECM1-207ENST00000498579 KIAA1683Q9H0B3 1180 aa22.65■■□□□ 1.22
ECM1-207ENST00000498579 LOC285556D6RIA3 1793 aa22.65■■□□□ 1.22
ECM1-207ENST00000498579 PTPRFP10586 1907 aa22.65■■□□□ 1.22
ECM1-207ENST00000498579 ADCY3O60266 1144 aa22.64■■□□□ 1.21
ECM1-207ENST00000498579 MYCP01106 439 aaPredicted RBP22.64■■□□□ 1.21
ECM1-207ENST00000498579 EMILIN3Q9NT22 766 aa22.64■■□□□ 1.21
ECM1-207ENST00000498579 GABRQQ9UN88 632 aa22.64■■□□□ 1.21
ECM1-207ENST00000498579 MYO5AQ9Y4I1 1855 aaKnown RBP22.64■■□□□ 1.21
ECM1-207ENST00000498579 ERC2O15083 957 aa22.63■■□□□ 1.21
ECM1-207ENST00000498579 CAPN2P17655 700 aa22.63■■□□□ 1.21
ECM1-207ENST00000498579 HERVK_113P62684 666 aa22.63■■□□□ 1.21
ECM1-207ENST00000498579 KBTBD3Q8NAB2 608 aa22.63■■□□□ 1.21
ECM1-207ENST00000498579 GPRC5AQ8NFJ5 357 aa22.63■■□□□ 1.21
ECM1-207ENST00000498579 P2RX7Q99572 595 aaKnown RBP22.63■■□□□ 1.21
ECM1-207ENST00000498579 ZBTB47Q9UFB7 747 aaPredicted RBP22.63■■□□□ 1.21
ECM1-207ENST00000498579 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L15C9J2P7 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L13C9JLJ4 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L11C9JVI0 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L18D6R9N7 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L22D6RA61 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L17D6RBQ6 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L19D6RCP7 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L20D6RJB6 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
ECM1-207ENST00000498579 USP17L24Q0WX57 530 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 TMEM179Q6ZVK1 233 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 PCDHB15Q9Y5E8 787 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 CDK5RAP2Q96SN8 1893 aa22.62■■□□□ 1.21
ECM1-207ENST00000498579 ATAD5Q96QE3 1844 aa22.61■■□□□ 1.21
ECM1-207ENST00000498579 MPHOSPH10O00566 681 aaKnown RBP22.61■■□□□ 1.21
ECM1-207ENST00000498579 GJB1P08034 283 aa22.61■■□□□ 1.21
ECM1-207ENST00000498579 CCDC17Q96LX7 622 aa22.61■■□□□ 1.21
ECM1-207ENST00000498579 SLC4A4Q9Y6R1 1079 aa22.61■■□□□ 1.21
ECM1-207ENST00000498579 BRCA2P51587 3418 aa22.6■■□□□ 1.21
ECM1-207ENST00000498579 PRKAB2O43741 272 aa22.6■■□□□ 1.21
ECM1-207ENST00000498579 CCL5P13501 91 aa22.6■■□□□ 1.21
ECM1-207ENST00000498579 AAMPQ13685 434 aa22.6■■□□□ 1.21
ECM1-207ENST00000498579 MTFR1Q15390 333 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms