RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 EPAS1Q99814 870 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 IDI2Q9BXS1 227 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 BICC1Q9H694 974 aaKnown RBP7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 CNNM1Q9NRU3 951 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 MTMR10Q9NXD2 777 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 STAP2Q9UGK3 403 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 AFG3L2Q9Y4W6 797 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 CHD9Q3L8U1 2897 aa7.07□□□□□ -1.28
CSNK1E-214ENST00000498529 SMCHD1A6NHR9 2005 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 PTPRAP18433 802 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 HOXD10P28358 340 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 UBXN2AP68543 259 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 EXOSC9Q06265 439 aaKnown RBP7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 PTGDRQ13258 359 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 DIXDC1Q155Q3 683 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 FAM110CQ1W6H9 321 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 Q7L0L9 218 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 MIGA2Q7L4E1 593 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 ATG9AQ7Z3C6 839 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 SCYL3Q8IZE3 742 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 ZNF710Q8N1W2 664 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 ANKLE1Q8NAG6 615 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 DDX12PQ92771 950 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 DPF3Q92784 378 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 HOOK2Q96ED9 719 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 COL25A1Q9BXS0 654 aaPredicted RBP7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.06□□□□□ -1.284e-8■■□□□ 12.3
CSNK1E-214ENST00000498529 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 DDX4Q9NQI0 724 aaKnown RBP7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 GJD2Q9UKL4 321 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 CHD7Q9P2D1 2997 aa7.06□□□□□ -1.28
CSNK1E-214ENST00000498529 GREB1LQ9C091 1923 aaPredicted RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 PDS5AQ29RF7 1337 aaKnown RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 PLIN1O60240 522 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 WDHD1O75717 1129 aaPredicted RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 FMNL1O95466 1100 aaPredicted RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 IGHA2P01877 340 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 TRIM32Q13049 653 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 CHAF1AQ13111 956 aaPredicted RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 TREML2Q5T2D2 321 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 POTEEQ6S8J3 1075 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 KLHDC4Q8TBB5 520 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 PAWRQ96IZ0 340 aaKnown RBP7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 GUCD1Q96NT3 240 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 DEFB118Q96PH6 123 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 OGDHLQ9ULD0 1010 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 BDP1A6H8Y1 2624 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 MYH7P12883 1935 aa7.05□□□□□ -1.28
CSNK1E-214ENST00000498529 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 MYO9BQ13459 2157 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 DDTLA6NHG4 134 aaPredicted RBP7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 ENTPD3O75355 529 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 MAGEA10P43363 369 aaPredicted RBP7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 RHBDL3P58872 404 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 WDR63Q8IWG1 891 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 TDHQ8IZJ6 230 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 TRIB2Q92519 343 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 USP6NLQ92738 828 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 SRCIN1Q9C0H9 1055 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 TMOD2Q9NZR1 351 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 MORF4L1Q9UBU8 362 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 AGTPBP1Q9UPW5 1226 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 MCM3APO60318 1980 aa7.04□□□□□ -1.28
CSNK1E-214ENST00000498529 TRANK1O15050 2925 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 HMGCRP04035 888 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 RGS3P49796 1198 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 TCP10Q12799 353 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 TAF7LQ5H9L4 462 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 SH3D19Q5HYK7 790 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 METTL24Q5JXM2 366 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 FAM109BQ6ICB4 259 aaPredicted RBP7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 CCDC84Q86UT8 332 aaPredicted RBP7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 DEFB123Q8N688 67 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 WDR66Q8TBY9 1149 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 USP44Q9H0E7 712 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 PLA2G2EQ9NZK7 142 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 ZMYND8Q9ULU4 1186 aaPredicted RBP7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 PCDHGA4Q9Y5G9 962 aa7.03□□□□□ -1.28
CSNK1E-214ENST00000498529 EYA2O00167 538 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 TNPO2O14787 897 aaKnown RBP7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 HOXB1P14653 301 aaPredicted RBP7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 PHKA1P46020 1223 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 CAVIN4Q5BKX8 364 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 FASTKD5Q7L8L6 764 aaKnown RBP7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 NECAB2Q7Z6G3 386 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 LPIN2Q92539 896 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 DNAJC18Q9H819 358 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 ZSWIM6Q9HCJ5 1215 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 NPDC1Q9NQX5 325 aaPredicted RBP7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 ZHX2Q9Y6X8 837 aa7.02□□□□□ -1.29
CSNK1E-214ENST00000498529 RPTORQ8N122 1335 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 LCTP09848 1927 aa7.01□□□□□ -1.29
CSNK1E-214ENST00000498529 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms