RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 TEX13AQ9BXU3 409 aaPredicted RBP13.06□□□□□ -0.32
PBX1-211ENST00000498497 RGL1Q9NZL6 768 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
PBX1-211ENST00000498497 PRPHP41219 470 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 AGAP11Q8TF27 550 aa13.06□□□□□ -0.32
PBX1-211ENST00000498497 CCDC43Q96MW1 224 aaKnown RBP13.06□□□□□ -0.32
PBX1-211ENST00000498497 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
PBX1-211ENST00000498497 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
PBX1-211ENST00000498497 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
PBX1-211ENST00000498497 DPPA5A6NC42 116 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
PBX1-211ENST00000498497 SMNDC1O75940 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
PBX1-211ENST00000498497 PFKFB1P16118 471 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 KCNJ6P48051 423 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 C15orf41Q9Y2V0 281 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 ERVK-7P63135 1459 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 SETSIPP0DME0 302 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 ATP4AP20648 1035 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
PBX1-211ENST00000498497 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 FAM81AQ8TBF8 368 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 CUL5Q93034 780 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 EEF2KMTQ96G04 330 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
PBX1-211ENST00000498497 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 ADD1P35611 737 aaKnown RBP13.04□□□□□ -0.32
PBX1-211ENST00000498497 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 CWF19L1Q69YN2 538 aaKnown RBP13.04□□□□□ -0.32
PBX1-211ENST00000498497 HOOK3Q86VS8 718 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 C2CD2Q9Y426 696 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 RNF8O76064 485 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 NR1D1P20393 614 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
PBX1-211ENST00000498497 ZIM3Q96PE6 472 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 EPN3Q9H201 632 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 RCOR1Q9UKL0 485 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 PPP1R37O75864 691 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 PCK1P35558 622 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 SLC8A3P57103 927 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
PBX1-211ENST00000498497 RNF220Q5VTB9 566 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
PBX1-211ENST00000498497 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
PBX1-211ENST00000498497 PDE2AO00408 941 aaPredicted RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 SYKP43405 635 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 TEFQ10587 303 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 TAF11Q15544 211 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 PTGISQ16647 500 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 SMYD4Q8IYR2 804 aaPredicted RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 SNRNP27Q8WVK2 155 aaKnown RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 LRRC1Q9BTT6 524 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 N4BP3O15049 544 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
PBX1-211ENST00000498497 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
PBX1-211ENST00000498497 CASP1P29466 404 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 ABL2P42684 1182 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.32
PBX1-211ENST00000498497 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 ERICH1Q86X53 443 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 CCDC47Q96A33 483 aaKnown RBP13.02□□□□□ -0.32
PBX1-211ENST00000498497 PLEKHG4BQ96PX9 1271 aa13.02□□□□□ -0.32
PBX1-211ENST00000498497 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.32
PBX1-211ENST00000498497 BZW2Q9Y6E2 419 aaKnown RBP13.02□□□□□ -0.32
PBX1-211ENST00000498497 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 ZSCAN9O15535 394 aaPredicted RBP13.02□□□□□ -0.33
PBX1-211ENST00000498497 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 PSMA5P28066 241 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 CCNI2Q6ZMN8 369 aaPredicted RBP13.02□□□□□ -0.33
PBX1-211ENST00000498497 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
PBX1-211ENST00000498497 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 SPTLC2O15270 562 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 OPA1O60313 960 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms