RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
RNF8-208ENST00000498460 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
RNF8-208ENST00000498460 HMMRO75330 724 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 GDF11O95390 407 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 BACE1P56817 501 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 MTMR2Q13614 643 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 FAM110CQ1W6H9 321 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
RNF8-208ENST00000498460 RHPN1Q8TCX5 695 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
RNF8-208ENST00000498460 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 DDX19BQ9UMR2 479 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
RNF8-208ENST00000498460 PLXNB2O15031 1838 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 GJB1P08034 283 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 ELNP15502 786 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
RNF8-208ENST00000498460 TTF1Q15361 905 aaPredicted RBP12.03□□□□□ -0.48
RNF8-208ENST00000498460 METTL16Q86W50 562 aaKnown RBP12.03□□□□□ -0.48
RNF8-208ENST00000498460 RPAP2Q8IXW5 612 aaPredicted RBP12.03□□□□□ -0.48
RNF8-208ENST00000498460 KIF1BPQ96EK5 621 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
RNF8-208ENST00000498460 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 GINM1Q9NU53 330 aa12.03□□□□□ -0.48
RNF8-208ENST00000498460 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.48
RNF8-208ENST00000498460 C19orf81C9J6K1 198 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
RNF8-208ENST00000498460 GJA8P48165 433 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 JAG1P78504 1218 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
RNF8-208ENST00000498460 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
RNF8-208ENST00000498460 PXYLP1Q8TE99 480 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 ZBTB21Q9ULJ3 1066 aa12.02□□□□□ -0.49
RNF8-208ENST00000498460 DNAH12Q6ZR08 3092 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 INHAP05111 366 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 IRF5Q13568 498 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 SLC9C2Q5TAH2 1124 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 U2AF1L4Q8WU68 220 aaKnown RBP12.01□□□□□ -0.49
RNF8-208ENST00000498460 DPF3Q92784 378 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
RNF8-208ENST00000498460 ZBTB40Q9NUA8 1239 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 SERPINB13Q9UIV8 391 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
RNF8-208ENST00000498460 DDX60LQ5H9U9 1706 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 GOLIM4O00461 696 aa12□□□□□ -0.49
RNF8-208ENST00000498460 RAB11FIP3O75154 756 aa12□□□□□ -0.49
RNF8-208ENST00000498460 GH2P01242 217 aa12□□□□□ -0.49
RNF8-208ENST00000498460 TFRCP02786 760 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
RNF8-208ENST00000498460 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
RNF8-208ENST00000498460 RAB3GAP1Q15042 981 aa12□□□□□ -0.49
RNF8-208ENST00000498460 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
RNF8-208ENST00000498460 HABP4Q5JVS0 413 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 P2RX7Q99572 595 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 FEZ1Q99689 392 aa12□□□□□ -0.49
RNF8-208ENST00000498460 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
RNF8-208ENST00000498460 ZNFX1Q9P2E3 1918 aaKnown RBP11.99□□□□□ -0.49
RNF8-208ENST00000498460 SGPL1O95470 568 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 PDE6AP16499 860 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 HERVK_113P62684 666 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
RNF8-208ENST00000498460 ABCB5Q2M3G0 1257 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 TATDN1Q6P1N9 297 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 USP17L2Q6R6M4 530 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 SIRT2Q8IXJ6 389 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 GPRC5AQ8NFJ5 357 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.99□□□□□ -0.49
RNF8-208ENST00000498460 DEFB118Q96PH6 123 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 RIOK1Q9BRS2 568 aaKnown RBP11.99□□□□□ -0.49
RNF8-208ENST00000498460 HTATIP2Q9BUP3 242 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 EHD4Q9H223 541 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 MORF4L1Q9UBU8 362 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
RNF8-208ENST00000498460 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 H0YGN5 161 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
RNF8-208ENST00000498460 PLCD1P51178 756 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 PAGR1Q9BTK6 254 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 MCM9Q9NXL9 1143 aa11.98□□□□□ -0.49
RNF8-208ENST00000498460 PEX10O60683 326 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 HMGCRP04035 888 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 CAPN2P17655 700 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 USP14P54578 494 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 PDE3AQ14432 1141 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 GTF3C2Q8WUA4 911 aaPredicted RBP11.97□□□□□ -0.49
RNF8-208ENST00000498460 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
RNF8-208ENST00000498460 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
RNF8-208ENST00000498460 PAG1Q9NWQ8 432 aa11.97□□□□□ -0.49
RNF8-208ENST00000498460 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms