RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 CRACR2BQ8N4Y2 399 aaPredicted RBP22.55■■□□□ 1.2
NKX2-1-202ENST00000498187 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 NR5A1Q13285 461 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 PTPN21Q16825 1174 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 NUP133Q8WUM0 1156 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 LRP2BPQ9P2M1 347 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 POSTNQ15063 836 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 CARD6Q9BX69 1037 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 CALCOCO1Q9P1Z2 691 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 MAN1B1Q9UKM7 699 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 PPP2R2CQ9Y2T4 447 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
NKX2-1-202ENST00000498187 CCDC196A0A1B0GTZ2 297 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 POLR2DO15514 142 aaKnown RBP22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 PLA2G4AP47712 749 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 GOLGA8FQ08AF8 430 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 GOLGA8DPQ0D2H9 430 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 ZNF654Q8IZM8 581 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 SERTAD1Q9UHV2 236 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 VWA3AA6NCI4 1184 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 UBAP1LF5GYI3 381 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 PRR29P0C7W0 189 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 IGHMBP2P38935 993 aaKnown RBP22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 CCDC152Q4G0S7 254 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 TMTC2Q8N394 836 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 FANCBQ8NB91 859 aa22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 RNF41Q9H4P4 317 aaPredicted RBP22.53■■□□□ 1.2
NKX2-1-202ENST00000498187 DOT1LQ8TEK3 1739 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 TOM1O60784 492 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 CYP2C19P33261 490 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 PPARAQ07869 468 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 HSP90AA4PQ58FG1 418 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 TEX35Q5T0J7 233 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 TMEM139Q8IV31 216 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 BAG1Q99933 345 aaPredicted RBP22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 MTA3Q9BTC8 594 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 INTS13Q9NVM9 706 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 MYH6P13533 1939 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 STX10O60499 249 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 CASQ1P31415 396 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 INTS5Q6P9B9 1019 aaKnown RBP22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 OXER1Q8TDS5 423 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 UBAC1Q9BSL1 405 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 PHLPP1O60346 1717 aa22.52■■□□□ 1.2
NKX2-1-202ENST00000498187 WNK3Q9BYP7 1800 aa22.52■■□□□ 1.19
NKX2-1-202ENST00000498187 ATP2B1P20020 1258 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 COL16A1Q07092 1604 aaPredicted RBP22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 ERICH4A6NGS2 130 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 FANCGO15287 622 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 CYP7A1P22680 504 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 RCAN1P53805 252 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 TBX2Q13207 712 aaPredicted RBP22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 ADGRA1Q86SQ6 560 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 SDR42E1Q8WUS8 393 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 IQSEC3Q9UPP2 1182 aaPredicted RBP22.51■■□□□ 1.19
NKX2-1-202ENST00000498187 MINDY4BA8MYZ0 360 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 CHRNDQ07001 517 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 NT5DC1Q5TFE4 455 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 GRAMD1CQ8IYS0 662 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 GPR161Q8N6U8 529 aaKnown RBP22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 ZNF579Q8NAF0 562 aaKnown RBP22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 SMARCE1Q969G3 411 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 DACH1Q9UI36 760 aa22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 SRPRBQ9Y5M8 271 aaKnown RBP22.5■■□□□ 1.19
NKX2-1-202ENST00000498187 ZNF827Q17R98 1081 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 PDILTQ8N807 584 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 A0A0G2JS52 829 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 SARSP49591 514 aaKnown RBP22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 GNG11P61952 73 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 MAP3K9P80192 1104 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 CEP131Q9UPN4 1083 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 NFE2L3Q9Y4A8 694 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 TNKSO95271 1327 aa22.49■■□□□ 1.19
NKX2-1-202ENST00000498187 CAMTA2O94983 1202 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 CDK11BP21127 795 aaKnown RBP22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 CRKLP46109 303 aaKnown RBP22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 MORC3Q14149 939 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 PARP10Q53GL7 1025 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 SPECC1LQ69YQ0 1117 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 FAM177A1Q8N128 213 aaPredicted RBP22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 MLKLQ8NB16 471 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 SEC23AQ15436 765 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 USP49Q70CQ1 688 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 TRMT44Q8IYL2 757 aaKnown RBP22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 ABCF2Q9UG63 623 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 RTL9Q8NET4 1388 aa22.48■■□□□ 1.19
NKX2-1-202ENST00000498187 SMIM22K7EJ46 135 aa22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 ACTN4O43707 911 aaKnown RBP22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 NTSR2O95665 410 aa22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 ESR2Q92731 530 aa22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 NIP7Q9Y221 180 aaKnown RBP eCLIP22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 ZNF18P17022 549 aa22.47■■□□□ 1.19
NKX2-1-202ENST00000498187 ATP6V1AP38606 617 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms