RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 RCAN1P53805 252 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 SOGA3Q5TF21 947 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 C16orf86Q6ZW13 317 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 CATIPQ7Z7H3 387 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 GJB4Q9NTQ9 266 aa20.75■□□□□ 0.91
CHRNA4-206ENST00000498043 IARSP41252 1262 aaKnown RBP20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 FANCBQ8NB91 859 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 TMEM87AQ8NBN3 555 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 AIFM3Q96NN9 605 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 SGIP1Q9BQI5 828 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 TSPY3P0CV98 308 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 TSPY8P0CW00 308 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 RASA1P20936 1047 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 CMTR1Q8N1G2 835 aaKnown RBP20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 SLC26A6Q9BXS9 759 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 MYH8P13535 1937 aa20.74■□□□□ 0.91
CHRNA4-206ENST00000498043 FER1L6Q2WGJ9 1857 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 GADD45BO75293 160 aaPredicted RBP20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 RAD17O75943 681 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 CDK8P49336 464 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 KRT85P78386 507 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 NFIAQ12857 509 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 ZNF444Q8N0Y2 327 aaPredicted RBP20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 CCDC82Q8N4S0 544 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 ZNF287Q9HBT7 754 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 UBE2Q2LH0YL09 131 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 CACNB3P54284 484 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 TPRNQ4KMQ1 711 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 ALG1Q9BT22 464 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 IL17RBQ9NRM6 502 aa20.73■□□□□ 0.91
CHRNA4-206ENST00000498043 CCDC196A0A1B0GTZ2 297 aa20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 IFNAR1P17181 557 aa20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 DEKP35659 375 aaKnown RBP20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 HDLBPQ00341 1268 aaKnown RBP20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 SSRP1Q08945 709 aaKnown RBP20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 RCSD1Q6JBY9 416 aa20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 OSBPL5Q9H0X9 879 aaPredicted RBP20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 STK36Q9NRP7 1315 aa20.72■□□□□ 0.91
CHRNA4-206ENST00000498043 DDAH1O94760 285 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 FMNL1O95466 1100 aaPredicted RBP20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 NT5C2P49902 561 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 TROAPQ12815 778 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 CAVIN1Q6NZI2 390 aaKnown RBP20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 PSMD14O00487 310 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 MRIQ9BWK5 157 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 MYH6P13533 1939 aa20.71■□□□□ 0.91
CHRNA4-206ENST00000498043 MBD3O95983 291 aa20.7■□□□□ 0.9
CHRNA4-206ENST00000498043 PTGER2P43116 358 aa20.7■□□□□ 0.9
CHRNA4-206ENST00000498043 TTC6Q86TZ1 520 aa20.7■□□□□ 0.9
CHRNA4-206ENST00000498043 NIM1KQ8IY84 436 aa20.7■□□□□ 0.9
CHRNA4-206ENST00000498043 TFIP11Q9UBB9 837 aaKnown RBP20.7■□□□□ 0.9
CHRNA4-206ENST00000498043 CALM1P0DP23 149 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 CALM2P0DP24 149 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 CALM3P0DP25 149 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 CSPP1Q1MSJ5 1256 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 RSBN1LQ6PCB5 846 aaPredicted RBP20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 NBPF11Q86T75 865 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 TRIM22Q8IYM9 498 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 KAT14Q9H8E8 782 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 RBM27Q9P2N5 1060 aaKnown RBP20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 PLEKHA8P1O95397 391 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 GUCY1A2P33402 732 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 CFAP100Q494V2 611 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 CD2APQ9Y5K6 639 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 SIPA1L1O43166 1804 aa20.69■□□□□ 0.9
CHRNA4-206ENST00000498043 TCP10Q12799 353 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 DGKHQ86XP1 1220 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 ZFPM1Q8IX07 1006 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 CRACR2BQ8N4Y2 399 aaPredicted RBP20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 MYO3BQ8WXR4 1341 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 STX8Q9UNK0 236 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 CTCFLQ8NI51 663 aaPredicted RBP20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 VPS33BQ9H267 617 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 RBM28Q9NW13 759 aaKnown RBP20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 SERPINB13Q9UIV8 391 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 ZBTB12Q9Y330 459 aaPredicted RBP20.68■□□□□ 0.9
CHRNA4-206ENST00000498043 GABPAQ06546 454 aa20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 KRT40Q6A162 431 aa20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 PNMA1Q8ND90 353 aa20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 TDRD3Q9H7E2 651 aaKnown RBP20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 TCP11L1Q9NUJ3 509 aa20.67■□□□□ 0.9
CHRNA4-206ENST00000498043 NFKBIEO00221 500 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 HLA-DOAP06340 250 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 VIL1P09327 827 aaKnown RBP20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 UBE2HP62256 183 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 TRIM29Q14134 588 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 WASF1Q92558 559 aa20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 SCAND2PQ9GZW5 306 aaPredicted RBP20.66■□□□□ 0.9
CHRNA4-206ENST00000498043 FAM198AQ9UFP1 575 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms