RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CCDC122Q5T0U0 273 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 RESP18Q5W5W9 173 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 KBTBD3Q8NAB2 608 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 MLKLQ8NB16 471 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 ZKSCAN4Q969J2 545 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 SAR1BQ9Y6B6 198 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 CEP170BQ9Y4F5 1589 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 SKAP2O75563 359 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 CLNS1AP54105 237 aaKnown RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 TUBB4BP68371 445 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 IFT88Q13099 833 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 TUBB2AQ13885 445 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 ESCO1Q5FWF5 840 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 NAIF1Q69YI7 327 aaPredicted RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 NFXL1Q6ZNB6 911 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 CNGA4Q8IV77 575 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 LINS1Q8NG48 757 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 CHP1Q99653 195 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 TUBB2BQ9BVA1 445 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 VIPAS39Q9H9C1 493 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 TAB2Q9NYJ8 693 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 SETD1AO15047 1707 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 GYPCP04921 128 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 MCM3P25205 808 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.051e-7■■■■□ 19.8
GAPVD1-220ENST00000497580 NAA25Q14CX7 972 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 KRI1Q8N9T8 703 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 ARL8AQ96BM9 186 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 MED15Q96RN5 788 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 PAG1Q9NWQ8 432 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 SYNRGQ9UMZ2 1314 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 EZH2Q15910 746 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 CCDC70Q6NSX1 233 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 NAA15Q9BXJ9 866 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 SEC31BQ9NQW1 1179 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 A0A1B0GTH6 734 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 PPARAQ07869 468 aa14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 MSL3Q8N5Y2 521 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
GAPVD1-220ENST00000497580 DNA2P51530 1060 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 BIRC2Q13490 618 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 USP49Q70CQ1 688 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 UBE3BQ7Z3V4 1068 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 JAKMIP2Q96AA8 810 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 CHUKO15111 745 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 MYO1BO43795 1136 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 DDX58O95786 925 aaKnown RBP14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 ARHGAP25P42331 645 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 MAPK8IP1Q9UQF2 711 aa14.72□□□□□ -0.05
GAPVD1-220ENST00000497580 RNF225M0QZC1 329 aaPredicted RBP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 METAP2P50579 478 aaKnown RBP eCLIP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 GUCY1A3Q02108 690 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 B4GALNT4Q76KP1 1039 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 TMTC1Q8IUR5 882 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 CCDC114Q96M63 670 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 DENND2AQ9ULE3 1009 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 CHD2O14647 1828 aaKnown RBP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 ZC3H6P61129 1189 aaKnown RBP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 IMMTQ16891 758 aaKnown RBP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 MAST3O60307 1309 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 PLCD1P51178 756 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 SEC24CP53992 1094 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 PTPAQ15257 358 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 CYP26C1Q6V0L0 522 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 ANKRD24Q8TF21 1146 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 MIEF2Q96C03 454 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 HAUS7Q99871 368 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 KLC4Q9NSK0 619 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 HPS5Q9UPZ3 1129 aa14.71□□□□□ -0.05
GAPVD1-220ENST00000497580 MEFVO15553 781 aaPredicted RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 APBA1Q02410 837 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 HDAC7Q8WUI4 952 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 SLC26A6Q9BXS9 759 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 KCNJ14Q9UNX9 436 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 ABCC6O95255 1503 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 GRIN2DO15399 1336 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 KDRP35968 1356 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 M0R2C6 588 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 PPP6R2O75170 966 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 PDHBP11177 359 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 TSR1Q2NL82 804 aaKnown RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 PPP1R12BO60237 982 aaPredicted RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 SHOX2O60902 331 aaPredicted RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 IDEP14735 1019 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 AMPD2Q01433 879 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 CCDC40Q4G0X9 1142 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 CCNI2Q6ZMN8 369 aaPredicted RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 NOC3LQ8WTT2 800 aaKnown RBP14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 ABHD10Q9NUJ1 306 aa14.7□□□□□ -0.06
GAPVD1-220ENST00000497580 CCDC189A1A4V9 331 aa14.69□□□□□ -0.06
GAPVD1-220ENST00000497580 HSF2BPO75031 334 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms