RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.15
GGPS1-208ENST00000497327 PLD6Q8N2A8 252 aaKnown RBP7.84□□□□□ -1.15
GGPS1-208ENST00000497327 FAM181AQ8N9Y4 354 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 CD109Q6YHK3 1445 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 GLI2P10070 1586 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 CLSPNQ9HAW4 1339 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 TSPY4P0CV99 314 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 TSPY10P0CW01 314 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 YBX3P16989 372 aaKnown RBP eCLIP7.83□□□□□ -1.162e-7■■□□□ 13
GGPS1-208ENST00000497327 ARNTP27540 789 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 BIN2Q9UBW5 565 aaPredicted RBP7.83□□□□□ -1.16
GGPS1-208ENST00000497327 SLC5A6Q9Y289 635 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 C9orf84Q5VXU9 1444 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 MYO5CQ9NQX4 1742 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 ANKRD30AQ9BXX3 1397 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 ABCC1P33527 1531 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 SYCP2Q9BX26 1530 aa7.83□□□□□ -1.16
GGPS1-208ENST00000497327 FANCAO15360 1455 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 BRD1O95696 1058 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 NME2P22392 152 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 BNIP3Q12983 259 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 ISL2Q96A47 359 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 DUSP23Q9BVJ7 150 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 AKAP2Q9Y2D5 859 aa7.82□□□□□ -1.16
GGPS1-208ENST00000497327 MAST1Q9Y2H9 1570 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 MAPK1P28482 360 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 PLCB3Q01970 1234 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 OGFOD2Q6N063 350 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 GPBAR1Q8TDU6 330 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 MISP3Q96FF7 219 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 NECAB3Q96P71 396 aaPredicted RBP7.81□□□□□ -1.16
GGPS1-208ENST00000497327 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
GGPS1-208ENST00000497327 CROCC2H7BZ55 1655 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 RTEL1-TNFRSF6BF6WH68 1400 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 SCAPERQ9BY12 1400 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
GGPS1-208ENST00000497327 PAPLNO95428 1278 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 JUNBP17275 347 aaPredicted RBP7.8□□□□□ -1.16
GGPS1-208ENST00000497327 NTF4P34130 210 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 ERVK-24P63145 666 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
GGPS1-208ENST00000497327 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
GGPS1-208ENST00000497327 AFAP1Q8N556 730 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 KDM6BO15054 1643 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 NEO1Q92859 1461 aa7.8□□□□□ -1.16
GGPS1-208ENST00000497327 ENC1O14682 589 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 BMP6P22004 513 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 OXCT1P55809 520 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 FMR1Q06787 632 aaKnown RBP eCLIP7.79□□□□□ -1.16
GGPS1-208ENST00000497327 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 RNF214Q8ND24 703 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 ASIC4Q96FT7 647 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 MKNK2Q9HBH9 465 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 PLAGL2Q9UPG8 496 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 KIF15Q9NS87 1388 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 DENND4BO75064 1496 aaPredicted RBP7.79□□□□□ -1.16
GGPS1-208ENST00000497327 ADGRL1O94910 1474 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 GCC2Q8IWJ2 1684 aa7.79□□□□□ -1.16
GGPS1-208ENST00000497327 ANKRD50Q9ULJ7 1429 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 PAGE1O75459 146 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 CD8BP10966 210 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 FUT4P22083 530 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 CD96P40200 585 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 RASIP1Q5U651 963 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 FAM214BQ7L5A3 538 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 TOP6BLQ8N6T0 577 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
GGPS1-208ENST00000497327 CEACAM5P06731 702 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 GSTT1P30711 240 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 PRKCQQ04759 706 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 RING1Q06587 406 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 TPTE2Q6XPS3 522 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 UBE3DQ7Z6J8 389 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 FBF1Q8TES7 1133 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 ADAMTS6Q9UKP5 1117 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 VAV3Q9UKW4 847 aa7.77□□□□□ -1.17
GGPS1-208ENST00000497327 SPAG9O60271 1321 aaKnown RBP7.77□□□□□ -1.17
GGPS1-208ENST00000497327 ADGBQ8N7X0 1667 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 IFI16Q16666 785 aaKnown RBP7.76□□□□□ -1.17
GGPS1-208ENST00000497327 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
GGPS1-208ENST00000497327 POU5F2Q8N7G0 328 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 ANKRD24Q8TF21 1146 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 HEXIM2Q96MH2 286 aaKnown RBP7.76□□□□□ -1.17
GGPS1-208ENST00000497327 MPHOSPH9Q99550 1183 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 MBNL3Q9NUK0 354 aaKnown RBP7.76□□□□□ -1.17
GGPS1-208ENST00000497327 PPM1HQ9ULR3 514 aa7.76□□□□□ -1.17
GGPS1-208ENST00000497327 POGZQ7Z3K3 1410 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms