RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 SMTNP53814 917 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 DNAJC5GQ8N7S2 189 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
HOXA9-206ENST00000497089 CCDC191Q8NCU4 936 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
HOXA9-206ENST00000497089 CHMP3Q9Y3E7 222 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 ADAMTSL1Q8N6G6 1762 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 IQCA1LA6NCM1 817 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 A6NJY4 79 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 DDX58O95786 925 aaKnown RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 CENPCQ03188 943 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 GRAPQ13588 217 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 TLR1Q15399 786 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 TWISTNBQ3B726 338 aaPredicted RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 TAF7LQ5H9L4 462 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 GPC2Q8N158 579 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 JDP2Q8WYK2 163 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 FAM89AQ96GI7 184 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 METTL22Q9BUU2 404 aaPredicted RBP8.18□□□□□ -1.1
HOXA9-206ENST00000497089 BACH2Q9BYV9 841 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 DNMT3LQ9UJW3 386 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 TAF1P21675 1872 aa8.18□□□□□ -1.1
HOXA9-206ENST00000497089 DUOX1Q9NRD9 1551 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 ZNF541Q9H0D2 1346 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 LTBP1Q14766 1721 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 IRS4O14654 1257 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 ABL1P00519 1130 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 PCCAP05165 728 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 HMGB1P09429 215 aaKnown RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 MAP7D2Q96T17 732 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 GRIP2Q9C0E4 1043 aa8.17□□□□□ -1.1
HOXA9-206ENST00000497089 TMX4Q9H1E5 349 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 TSPAN10Q9H1Z9 355 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 TAF1DQ9H5J8 278 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 SCHIP1Q9P0W5 487 aaPredicted RBP8.17□□□□□ -1.1
HOXA9-206ENST00000497089 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
HOXA9-206ENST00000497089 MAN1A2O60476 641 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 IGSF3O75054 1194 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 SCNN1AP37088 669 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 SERPINB4P48594 390 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 EPHA4P54764 986 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 FKBP5Q13451 457 aaPredicted RBP8.16□□□□□ -1.1
HOXA9-206ENST00000497089 KSR2Q6VAB6 950 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 SLC9A9Q8IVB4 645 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 SUPT20HQ8NEM7 779 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 MYD88Q99836 296 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 STK31Q9BXU1 1019 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
HOXA9-206ENST00000497089 MAP3K2Q9Y2U5 619 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 COL4A1P02462 1669 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 CDHR2Q9BYE9 1310 aa8.16□□□□□ -1.1
HOXA9-206ENST00000497089 PI4KAP2A4QPH2 592 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 SOWAHDA6NJG2 315 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 CDK2AP1O14519 115 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 VAMP4O75379 141 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 IGKV5-2P06315 115 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 EIF6P56537 245 aaKnown RBP8.15□□□□□ -1.1
HOXA9-206ENST00000497089 MTFR1Q15390 333 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.15□□□□□ -1.1
HOXA9-206ENST00000497089 DPP8Q6V1X1 898 aaPredicted RBP8.15□□□□□ -1.1
HOXA9-206ENST00000497089 LDHDQ86WU2 507 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 PI4KAP1Q8N8J0 262 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 CELF1Q92879 486 aaKnown RBP8.15□□□□□ -1.1
HOXA9-206ENST00000497089 COL26A1Q96A83 441 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
HOXA9-206ENST00000497089 EGFL7Q9UHF1 273 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 HACL1Q9UJ83 578 aa8.15□□□□□ -1.1
HOXA9-206ENST00000497089 MYH3P11055 1940 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 RTL9Q8NET4 1388 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 SOBPA7XYQ1 873 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 PPIP5K2O43314 1243 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 EPHX2P34913 555 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 RPS8P62241 208 aaKnown RBP8.14□□□□□ -1.11
HOXA9-206ENST00000497089 FOXK2Q01167 660 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 NEXNQ0ZGT2 675 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 TBCELQ5QJ74 424 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 G2E3Q7L622 706 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 PNMA8AQ86V59 439 aaPredicted RBP8.14□□□□□ -1.11
HOXA9-206ENST00000497089 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
HOXA9-206ENST00000497089 JMYQ8N9B5 988 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
HOXA9-206ENST00000497089 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 PASKQ96RG2 1323 aa8.14□□□□□ -1.11
HOXA9-206ENST00000497089 A0A0U1RQG5 324 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms