RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
ECM1-206ENST00000496744 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
ECM1-206ENST00000496744 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
ECM1-206ENST00000496744 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 MBD4O95243 580 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 BACE1P56817 501 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 DDX60LQ5H9U9 1706 aaKnown RBP13.18□□□□□ -0.3
ECM1-206ENST00000496744 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
ECM1-206ENST00000496744 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 GH2P01242 217 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
ECM1-206ENST00000496744 CYP2D6P10635 497 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 PSMC4P43686 418 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 MTMR2Q13614 643 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 PTCH2Q9Y6C5 1203 aa13.17□□□□□ -0.3
ECM1-206ENST00000496744 TTC41PQ6P2S7 1318 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
ECM1-206ENST00000496744 GNRH1P01148 92 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 CERKLQ49MI3 558 aaPredicted RBP13.16□□□□□ -0.3
ECM1-206ENST00000496744 ZSCAN25Q6NSZ9 544 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
ECM1-206ENST00000496744 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
ECM1-206ENST00000496744 LOC285556D6RIA3 1793 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 USP17L10C9JJH3 530 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 OSBPP22059 807 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
ECM1-206ENST00000496744 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
ECM1-206ENST00000496744 AAMPQ13685 434 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 KIF22Q14807 665 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 C12orf60Q5U649 245 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 DYNLL2Q96FJ2 89 aa13.15□□□□□ -0.3
ECM1-206ENST00000496744 ASCC2Q9H1I8 757 aaPredicted RBP13.15□□□□□ -0.3
ECM1-206ENST00000496744 BRCA2P51587 3418 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
ECM1-206ENST00000496744 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 USP17L21D6R901 530 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
ECM1-206ENST00000496744 MX1P20591 662 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 ABCB5Q2M3G0 1257 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 ACER1Q8TDN7 264 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
ECM1-206ENST00000496744 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 SRRDQ9UH36 339 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 SLC4A4Q9Y6R1 1079 aa13.14□□□□□ -0.31
ECM1-206ENST00000496744 MYH7P12883 1935 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 GSG1L2A8MUP6 293 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 ERC2O15083 957 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
ECM1-206ENST00000496744 FMNL1O95466 1100 aaPredicted RBP13.13□□□□□ -0.31
ECM1-206ENST00000496744 IGHDP01880 384 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 PRMT2P55345 433 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 SEPT2Q15019 361 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 CTR9Q6PD62 1173 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 SMC5Q8IY18 1101 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 APPBP2Q92624 585 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 C12orf42Q96LP6 360 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
ECM1-206ENST00000496744 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
ECM1-206ENST00000496744 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
ECM1-206ENST00000496744 A0A1W2PRG0 241 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 M0R2C6 588 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
ECM1-206ENST00000496744 GCLCP48506 637 aaPredicted RBP13.12□□□□□ -0.31
ECM1-206ENST00000496744 FCGRTP55899 365 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
ECM1-206ENST00000496744 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 USP17L2Q6R6M4 530 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 SH3TC2Q8TF17 1288 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
ECM1-206ENST00000496744 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms