RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 CERKLQ49MI3 558 aaPredicted RBP27.23■■□□□ 1.95
CHRD-217ENST00000496527 C12orf60Q5U649 245 aa27.23■■□□□ 1.95
CHRD-217ENST00000496527 CTR9Q6PD62 1173 aa27.23■■□□□ 1.95
CHRD-217ENST00000496527 ARPP21Q9UBL0 812 aaPredicted RBP27.23■■□□□ 1.95
CHRD-217ENST00000496527 TAOK2Q9UL54 1235 aa27.23■■□□□ 1.95
CHRD-217ENST00000496527 A0A0G2JLL6 359 aaPredicted RBP27.22■■□□□ 1.95
CHRD-217ENST00000496527 PATL2C9JE40 543 aaKnown RBP27.22■■□□□ 1.95
CHRD-217ENST00000496527 SHMT1P34896 483 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 JAG1P78504 1218 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 FASTKD5Q7L8L6 764 aaKnown RBP27.22■■□□□ 1.95
CHRD-217ENST00000496527 PRRT2Q7Z6L0 340 aaPredicted RBP27.22■■□□□ 1.95
CHRD-217ENST00000496527 ZNF280CQ8ND82 737 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 ZCCHC17Q9NP64 241 aaKnown RBP27.22■■□□□ 1.95
CHRD-217ENST00000496527 HELLSQ9NRZ9 838 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 SWAP70Q9UH65 585 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 ZBTB21Q9ULJ3 1066 aa27.22■■□□□ 1.95
CHRD-217ENST00000496527 CYP2D7A0A087X1C5 515 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 SPP2Q13103 211 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 CRHR2Q13324 411 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 TAF1CQ15572 869 aaPredicted RBP27.21■■□□□ 1.95
CHRD-217ENST00000496527 ANKRD23Q86SG2 305 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 DYNLL2Q96FJ2 89 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 NACAP1Q9BZK3 213 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 R3HDMLQ9H3Y0 253 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 CABP5Q9NP86 173 aa27.21■■□□□ 1.95
CHRD-217ENST00000496527 ATAD5Q96QE3 1844 aa27.2■■□□□ 1.95
CHRD-217ENST00000496527 BAZ2AQ9UIF9 1905 aaKnown RBP27.2■■□□□ 1.95
CHRD-217ENST00000496527 GPR25O00155 361 aa27.2■■□□□ 1.94
CHRD-217ENST00000496527 GH2P01242 217 aa27.2■■□□□ 1.94
CHRD-217ENST00000496527 TDO2P48775 406 aa27.2■■□□□ 1.94
CHRD-217ENST00000496527 ABCB5Q2M3G0 1257 aa27.2■■□□□ 1.94
CHRD-217ENST00000496527 SHROOM1Q2M3G4 852 aaPredicted RBP27.2■■□□□ 1.94
CHRD-217ENST00000496527 NOM1Q5C9Z4 860 aaKnown RBP27.2■■□□□ 1.94
CHRD-217ENST00000496527 ZFYVE28Q9HCC9 887 aa27.2■■□□□ 1.94
CHRD-217ENST00000496527 MOGSQ13724 837 aa27.19■■□□□ 1.94
CHRD-217ENST00000496527 SBK1Q52WX2 424 aa27.19■■□□□ 1.94
CHRD-217ENST00000496527 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
CHRD-217ENST00000496527 CCDC129Q6ZRS4 1044 aa27.19■■□□□ 1.94
CHRD-217ENST00000496527 CENPQQ7L2Z9 268 aaPredicted RBP27.19■■□□□ 1.94
CHRD-217ENST00000496527 WDR18Q9BV38 432 aa27.19■■□□□ 1.94
CHRD-217ENST00000496527 SDSP20132 328 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 MCMDC2Q4G0Z9 681 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 TTC22Q5TAA0 569 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 IFNL3Q8IZI9 196 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 SLC44A5Q8NCS7 719 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 ZNF296Q8WUU4 475 aaPredicted RBP27.18■■□□□ 1.94
CHRD-217ENST00000496527 FAM227BQ96M60 508 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 EPB41L4AQ9HCS5 686 aaPredicted RBP27.18■■□□□ 1.94
CHRD-217ENST00000496527 PHIPQ8WWQ0 1821 aa27.18■■□□□ 1.94
CHRD-217ENST00000496527 CASP8AP2Q9UKL3 1982 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 MINDY4BA8MYZ0 360 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 PDHXO00330 501 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 CDK8P49336 464 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 NMIQ13287 307 aaPredicted RBP27.17■■□□□ 1.94
CHRD-217ENST00000496527 RAB3GAP1Q15042 981 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 C16orf86Q6ZW13 317 aa27.17■■□□□ 1.94
CHRD-217ENST00000496527 A0A0D9SFI3 127 aa27.16■■□□□ 1.94
CHRD-217ENST00000496527 SMIM22K7EJ46 135 aa27.16■■□□□ 1.94
CHRD-217ENST00000496527 MPHOSPH10O00566 681 aaKnown RBP27.16■■□□□ 1.94
CHRD-217ENST00000496527 FKTNO75072 461 aa27.16■■□□□ 1.94
CHRD-217ENST00000496527 GPAT2Q6NUI2 795 aa27.16■■□□□ 1.94
CHRD-217ENST00000496527 HIP1O00291 1037 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 HMGCS2P54868 508 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 TNS4Q8IZW8 715 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 CCDC136Q96JN2 1154 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 NAPBQ9H115 298 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 DIAPH3Q9NSV4 1193 aa27.15■■□□□ 1.94
CHRD-217ENST00000496527 USP17L10C9JJH3 530 aa27.14■■□□□ 1.94
CHRD-217ENST00000496527 BACE1P56817 501 aa27.14■■□□□ 1.94
CHRD-217ENST00000496527 MTMR2Q13614 643 aa27.14■■□□□ 1.94
CHRD-217ENST00000496527 PROCA1Q8NCQ7 364 aaPredicted RBP27.14■■□□□ 1.94
CHRD-217ENST00000496527 CCDC17Q96LX7 622 aa27.14■■□□□ 1.94
CHRD-217ENST00000496527 C19orf81C9J6K1 198 aa27.13■■□□□ 1.93
CHRD-217ENST00000496527 GSPT1P15170 499 aaKnown RBP27.13■■□□□ 1.93
CHRD-217ENST00000496527 SH3D19Q5HYK7 790 aa27.13■■□□□ 1.93
CHRD-217ENST00000496527 TMOD4Q9NZQ9 345 aa27.13■■□□□ 1.93
CHRD-217ENST00000496527 AGTPBP1Q9UPW5 1226 aa27.13■■□□□ 1.93
CHRD-217ENST00000496527 TLR2O60603 784 aa27.12■■□□□ 1.93
CHRD-217ENST00000496527 STK11IPQ8N1F8 1099 aa27.12■■□□□ 1.93
CHRD-217ENST00000496527 PARK7Q99497 189 aaKnown RBP27.12■■□□□ 1.93
CHRD-217ENST00000496527 SLC45A1Q9Y2W3 748 aa27.12■■□□□ 1.93
CHRD-217ENST00000496527 MFAP1P55081 439 aaKnown RBP27.11■■□□□ 1.93
CHRD-217ENST00000496527 SEPT2Q15019 361 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 VPS53Q5VIR6 699 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 CWC27Q6UX04 472 aaKnown RBP27.11■■□□□ 1.93
CHRD-217ENST00000496527 TMEM179Q6ZVK1 233 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 FEZ1Q99689 392 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 MKNK2Q9HBH9 465 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 PTPRFP10586 1907 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 CCDC171Q6TFL3 1326 aa27.11■■□□□ 1.93
CHRD-217ENST00000496527 AKR1B1P15121 316 aa27.1■■□□□ 1.93
CHRD-217ENST00000496527 GUCY1A2P33402 732 aa27.1■■□□□ 1.93
CHRD-217ENST00000496527 SP3Q02447 781 aa27.1■■□□□ 1.93
CHRD-217ENST00000496527 TREML2Q5T2D2 321 aa27.1■■□□□ 1.93
CHRD-217ENST00000496527 ZNF589Q86UQ0 364 aaPredicted RBP27.1■■□□□ 1.93
CHRD-217ENST00000496527 ZNF287Q9HBT7 754 aa27.1■■□□□ 1.93
CHRD-217ENST00000496527 ROBO3Q96MS0 1386 aa27.09■■□□□ 1.93
CHRD-217ENST00000496527 FOXP2O15409 715 aa27.09■■□□□ 1.93
CHRD-217ENST00000496527 SLC3A2P08195 630 aaKnown RBP27.09■■□□□ 1.93
CHRD-217ENST00000496527 PABPC4Q13310 644 aaKnown RBP eCLIP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms