RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 WDR18Q9BV38 432 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.4
CXCL12-208ENST00000496375 ASCC2Q9H1I8 757 aaPredicted RBP17.52■□□□□ 0.4
CXCL12-208ENST00000496375 GDF11O95390 407 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 GCLCP48506 637 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-208ENST00000496375 AAMPQ13685 434 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
CXCL12-208ENST00000496375 AACSQ86V21 672 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 MAGEB6Q8N7X4 407 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 MIGA1Q8NAN2 632 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 PXYLP1Q8TE99 480 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 MYH1P12882 1939 aa17.51■□□□□ 0.39
CXCL12-208ENST00000496375 HMMRO75330 724 aa17.5■□□□□ 0.39
CXCL12-208ENST00000496375 INHAP05111 366 aa17.5■□□□□ 0.39
CXCL12-208ENST00000496375 BACE1P56817 501 aa17.5■□□□□ 0.39
CXCL12-208ENST00000496375 TMOD4Q9NZQ9 345 aa17.5■□□□□ 0.39
CXCL12-208ENST00000496375 CEP290O15078 2479 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 USP5P45974 858 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 IRX3P78415 501 aaPredicted RBP17.49■□□□□ 0.39
CXCL12-208ENST00000496375 MAP3K12Q12852 859 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 CERS3Q8IU89 383 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
CXCL12-208ENST00000496375 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 ZBTB21Q9ULJ3 1066 aa17.49■□□□□ 0.39
CXCL12-208ENST00000496375 SUPT16HQ9Y5B9 1047 aaKnown RBP17.49■□□□□ 0.39
CXCL12-208ENST00000496375 C19orf81C9J6K1 198 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 USP17L10C9JJH3 530 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 H0YGN5 161 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
CXCL12-208ENST00000496375 HSP90AB4PQ58FF6 505 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 UBE2Q1Q7Z7E8 422 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 RHPN1Q8TCX5 695 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 DPF3Q92784 378 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 CRBNQ96SW2 442 aa17.48■□□□□ 0.39
CXCL12-208ENST00000496375 SGPL1O95470 568 aa17.47■□□□□ 0.39
CXCL12-208ENST00000496375 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-208ENST00000496375 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
CXCL12-208ENST00000496375 COLQQ9Y215 455 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-208ENST00000496375 APBB1O00213 710 aa17.46■□□□□ 0.39
CXCL12-208ENST00000496375 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-208ENST00000496375 GH2P01242 217 aa17.46■□□□□ 0.39
CXCL12-208ENST00000496375 TMED8Q6PL24 325 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-208ENST00000496375 P2RX7Q99572 595 aaKnown RBP17.46■□□□□ 0.39
CXCL12-208ENST00000496375 HTATIP2Q9BUP3 242 aa17.46■□□□□ 0.39
CXCL12-208ENST00000496375 PEX10O60683 326 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
CXCL12-208ENST00000496375 HERVK_113P62684 666 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CXCL12-208ENST00000496375 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 PAK6Q9NQU5 681 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-208ENST00000496375 SERPINB13Q9UIV8 391 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 GJD2Q9UKL4 321 aa17.45■□□□□ 0.38
CXCL12-208ENST00000496375 TTF1Q15361 905 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-208ENST00000496375 USP17L2Q6R6M4 530 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 TTC6Q86TZ1 520 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 KIF1BPQ96EK5 621 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
CXCL12-208ENST00000496375 EHD4Q9H223 541 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 TXNRD2Q9NNW7 524 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 EMILIN3Q9NT22 766 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 PLXNB2O15031 1838 aa17.44■□□□□ 0.38
CXCL12-208ENST00000496375 MAGEB6P1A0A0J9YX57 407 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 HMGCRP04035 888 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
CXCL12-208ENST00000496375 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
CXCL12-208ENST00000496375 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-208ENST00000496375 GPRC5AQ8NFJ5 357 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 FEZ1Q99689 392 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.43■□□□□ 0.38
CXCL12-208ENST00000496375 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
CXCL12-208ENST00000496375 NAV1Q8NEY1 1877 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 DDX60LQ5H9U9 1706 aaKnown RBP17.42■□□□□ 0.38
CXCL12-208ENST00000496375 GOLIM4O00461 696 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 PDE6AP16499 860 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 FXR1P51114 621 aaKnown RBP eCLIP17.42■□□□□ 0.38
CXCL12-208ENST00000496375 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 CHRDL2Q6WN34 429 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
CXCL12-208ENST00000496375 RBPJLQ9UBG7 517 aa17.42■□□□□ 0.38
CXCL12-208ENST00000496375 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-208ENST00000496375 CAPN2P17655 700 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 CYP2B6P20813 491 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 PLCD1P51178 756 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 ERVK-9P63128 1117 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 ERVK-24P63145 666 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 TRIM32Q13049 653 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
CXCL12-208ENST00000496375 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-208ENST00000496375 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
CXCL12-208ENST00000496375 PAGR1Q9BTK6 254 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms