RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-213ENST00000496347 ADD2P35612 726 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 HMGCS2P54868 508 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 MTMR2Q13614 643 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 SLC9C1Q4G0N8 1177 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 PTCH2Q9Y6C5 1203 aa19.01■□□□□ 0.63
HDAC4-213ENST00000496347 GDF11O95390 407 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 HOXD10P28358 340 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 PSMC4P43686 418 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 FCGRTP55899 365 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 UBE3CQ15386 1083 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 SLC4A8Q2Y0W8 1093 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 TREML2Q5T2D2 321 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 ZSCAN25Q6NSZ9 544 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 TATDN1Q6P1N9 297 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 LCORLQ8N3X6 602 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 ZNF333Q96JL9 665 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 TRIM47Q96LD4 638 aa19■□□□□ 0.63
HDAC4-213ENST00000496347 BACE1P56817 501 aa18.99■□□□□ 0.63
HDAC4-213ENST00000496347 NBPF11Q86T75 865 aa18.99■□□□□ 0.63
HDAC4-213ENST00000496347 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
HDAC4-213ENST00000496347 SRRDQ9UH36 339 aa18.99■□□□□ 0.63
HDAC4-213ENST00000496347 PCDHB15Q9Y5E8 787 aa18.99■□□□□ 0.63
HDAC4-213ENST00000496347 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 MBD4O95243 580 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 CTGFP29279 349 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 GCLCP48506 637 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-213ENST00000496347 FAM110CQ1W6H9 321 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 DCP1AQ9NPI6 582 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-213ENST00000496347 MCM9Q9NXL9 1143 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 TMOD4Q9NZQ9 345 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 MYPNQ86TC9 1320 aa18.98■□□□□ 0.63
HDAC4-213ENST00000496347 FMNL1O95466 1100 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-213ENST00000496347 GH2P01242 217 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-213ENST00000496347 OSBPP22059 807 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 JAG1P78504 1218 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 GABPAQ06546 454 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-213ENST00000496347 ATP8A2Q9NTI2 1148 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 TTC41PQ6P2S7 1318 aa18.97■□□□□ 0.63
HDAC4-213ENST00000496347 USP17L10C9JJH3 530 aa18.96■□□□□ 0.63
HDAC4-213ENST00000496347 SHMT1P34896 483 aa18.96■□□□□ 0.63
HDAC4-213ENST00000496347 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
HDAC4-213ENST00000496347 ARMT1Q9H993 441 aa18.96■□□□□ 0.63
HDAC4-213ENST00000496347 DOCK3Q8IZD9 2030 aa18.96■□□□□ 0.63
HDAC4-213ENST00000496347 HOXA7P31268 230 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-213ENST00000496347 PLCD1P51178 756 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 IRX3P78415 501 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-213ENST00000496347 AAMPQ13685 434 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 ABCB5Q2M3G0 1257 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 CERKLQ49MI3 558 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-213ENST00000496347 ANKRD13CQ8N6S4 541 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 KBTBD3Q8NAB2 608 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 RAET1EQ8TD07 263 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 FEZ1Q99689 392 aa18.95■□□□□ 0.62
HDAC4-213ENST00000496347 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-213ENST00000496347 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
HDAC4-213ENST00000496347 GTF3C2Q8WUA4 911 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-213ENST00000496347 C12orf42Q96LP6 360 aa18.94■□□□□ 0.62
HDAC4-213ENST00000496347 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
HDAC4-213ENST00000496347 TNPO2O14787 897 aaKnown RBP18.93■□□□□ 0.62
HDAC4-213ENST00000496347 ERC2O15083 957 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 ZFYP08048 801 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-213ENST00000496347 USP14P54578 494 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 PRKCZQ05513 592 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 TSHZ3Q63HK5 1081 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 USP17L2Q6R6M4 530 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 TMEM106CQ9BVX2 250 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
HDAC4-213ENST00000496347 POTEFA5A3E0 1075 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 HDAC1Q13547 482 aaPredicted RBP18.92■□□□□ 0.62
HDAC4-213ENST00000496347 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
HDAC4-213ENST00000496347 SLFNL1Q499Z3 407 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 SLAIN1Q8ND83 568 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 SH3TC2Q8TF17 1288 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 KIAA1683Q9H0B3 1180 aa18.92■□□□□ 0.62
HDAC4-213ENST00000496347 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
HDAC4-213ENST00000496347 ECM2O94769 699 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-213ENST00000496347 GRK4P32298 578 aa18.91■□□□□ 0.62
HDAC4-213ENST00000496347 APPBP2Q92624 585 aa18.91■□□□□ 0.62
HDAC4-213ENST00000496347 EMILIN3Q9NT22 766 aa18.91■□□□□ 0.62
HDAC4-213ENST00000496347 ARPP21Q9UBL0 812 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-213ENST00000496347 MORF4L1Q9UBU8 362 aa18.91■□□□□ 0.62
HDAC4-213ENST00000496347 GREB1LQ9C091 1923 aaPredicted RBP18.91■□□□□ 0.62
HDAC4-213ENST00000496347 PRKAB2O43741 272 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 CHGBP05060 677 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 MX1P20591 662 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 HERVK_113P62684 666 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 IRF5Q13568 498 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 TMEM179Q6ZVK1 233 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 PI4K2BQ8TCG2 481 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 COA7Q96BR5 231 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 GCC1Q96CN9 775 aa18.9■□□□□ 0.62
HDAC4-213ENST00000496347 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
HDAC4-213ENST00000496347 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms