RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	CHMP4B	Q9H444	224 aa	Known RBP	10.68	□□□□□ -0.7
NEPRO-223	ENST00000496206	ANTXR1	Q9H6X2	564 aa		10.68	□□□□□ -0.7
NEPRO-223	ENST00000496206	DNAJC18	Q9H819	358 aa		10.68	□□□□□ -0.7
NEPRO-223	ENST00000496206	AS3MT	Q9HBK9	375 aa		10.68	□□□□□ -0.7
NEPRO-223	ENST00000496206	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	IFIT2	P09913	472 aa	Known RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	GRK4	P32298	578 aa		10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	USP5	P45974	858 aa		10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	PRKCZ	Q05513	592 aa		10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	TTF1	Q15361	905 aa	Predicted RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	TMED8	Q6PL24	325 aa	Predicted RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	METTL16	Q86W50	562 aa	Known RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	SIRT2	Q8IXJ6	389 aa		10.67	□□□□□ -0.7
NEPRO-223	ENST00000496206	TNPO2	O14787	897 aa	Known RBP	10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	RAB11FIP3	O75154	756 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	GDF11	O95390	407 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	MTMR2	Q13614	643 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	ANKRD13C	Q8N6S4	541 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	DNAJC2	Q99543	621 aa	Known RBP	10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	WDR18	Q9BV38	432 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	BIN2	Q9UBW5	565 aa	Predicted RBP	10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	ZBTB21	Q9ULJ3	1066 aa		10.66	□□□□□ -0.7
NEPRO-223	ENST00000496206	DNAH12	Q6ZR08	3092 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	GOLIM4	O00461	696 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	PDE6A	P16499	860 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	GCLC	P48506	637 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	BACE1	P56817	501 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	JAG1	P78504	1218 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	PDE3A	Q14432	1141 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	MTFR1	Q15390	333 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	FAM110C	Q1W6H9	321 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	SH3D19	Q5HYK7	790 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	SLC9C2	Q5TAH2	1124 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	C20orf194	Q5TEA3	1177 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	SLAIN1	Q8ND83	568 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	GINM1	Q9NU53	330 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	TMOD4	Q9NZQ9	345 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	GABRQ	Q9UN88	632 aa		10.65	□□□□□ -0.7
NEPRO-223	ENST00000496206	PLXNB2	O15031	1838 aa		10.65	□□□□□ -0.71
NEPRO-223	ENST00000496206	RANBP2	P49792	3224 aa	Known RBP	10.65	□□□□□ -0.71
NEPRO-223	ENST00000496206	MAGEB6P1	A0A0J9YX57	407 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	USP17L10	C9JJH3	530 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	ADCY3	O60266	1144 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	FLT3LG	P49771	235 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	UBXN2A	P68543	259 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	IRX3	P78415	501 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	COA7	Q96BR5	231 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	RIOK1	Q9BRS2	568 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	EHD4	Q9H223	541 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	SERPINB13	Q9UIV8	391 aa		10.64	□□□□□ -0.71
NEPRO-223	ENST00000496206	ZNF532	Q9HCE3	1301 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	C19orf81	C9J6K1	198 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	SLC34A2	O95436	690 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	GH2	P01242	217 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	CCL5	P13501	91 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	ELN	P15502	786 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	TATDN1	Q6P1N9	297 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	TTC6	Q86TZ1	520 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	EDC3	Q96F86	508 aa	Known RBP	10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	RNF208	Q9H0X6	261 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	PAG1	Q9NWQ8	432 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	TAOK2	Q9UL54	1235 aa		10.63	□□□□□ -0.71
NEPRO-223	ENST00000496206	TCRBV5S4A2T	A0A5A2	114 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	POLR3D	P05423	398 aa	Predicted RBP	10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	GJB1	P08034	283 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	ATP5J	P18859	108 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	HOXA7	P31268	230 aa	Predicted RBP	10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	IRF5	Q13568	498 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	RAB3GAP1	Q15042	981 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	CERKL	Q49MI3	558 aa	Predicted RBP	10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	PIP4P2	Q8N4L2	257 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	NKX2-3	Q8TAU0	364 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	SHISA4	Q96DD7	197 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	FEZ1	Q99689	392 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	LRRCC1	Q9C099	1032 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	BOLA2	Q9H3K6	86 aa		10.62	□□□□□ -0.71
NEPRO-223	ENST00000496206	INHA	P05111	366 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	GJA8	P48165	433 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	PLCD1	P51178	756 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	HERVK_113	P62684	666 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	ZYX	Q15942	572 aa	Known RBP	10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	ABCB5	Q2M3G0	1257 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	USP17L2	Q6R6M4	530 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	LCORL	Q8N3X6	602 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	PXYLP1	Q8TE99	480 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	P2RX7	Q99572	595 aa	Known RBP	10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	HAUS7	Q99871	368 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	UNC93B1	Q9H1C4	597 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	EMILIN3	Q9NT22	766 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	MCM9	Q9NXL9	1143 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	MORF4L1	Q9UBU8	362 aa		10.61	□□□□□ -0.71
NEPRO-223	ENST00000496206	TRIOBP	Q9H2D6	2365 aa		10.6	□□□□□ -0.71
NEPRO-223	ENST00000496206	SMARCA5	O60264	1052 aa	Predicted RBP	10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms