RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 TMEM253P0C7T8 217 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 KCNA1Q09470 495 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 SLBPQ14493 270 aaKnown RBP eCLIP6.68□□□□□ -1.34
CLK1-214ENST00000496205 INPP5AQ14642 412 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 SFRP5Q5T4F7 317 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 ATG14Q6ZNE5 492 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 TMC7Q7Z402 723 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 MFSD4AQ8N468 514 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 CAPN6Q9Y6Q1 641 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 IVNS1ABPQ9Y6Y0 642 aa6.68□□□□□ -1.34
CLK1-214ENST00000496205 INHBBP09529 407 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 PTPN11Q06124 597 aaPredicted RBP6.67□□□□□ -1.34
CLK1-214ENST00000496205 PDE4CQ08493 712 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 KCNA10Q16322 511 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 NKG7Q16617 165 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 C22orf34Q6ZV56 151 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 KCT2Q8NC54 265 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 ALPK1Q96QP1 1244 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 DCP1AQ9NPI6 582 aaPredicted RBP6.67□□□□□ -1.34
CLK1-214ENST00000496205 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
CLK1-214ENST00000496205 TPX2Q9ULW0 747 aaKnown RBP6.67□□□□□ -1.34
CLK1-214ENST00000496205 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
CLK1-214ENST00000496205 ERVFC1P60507 584 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 UBE2FQ969M7 185 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 MIPEPQ99797 713 aa6.66□□□□□ -1.34
CLK1-214ENST00000496205 DNAJC25-GNG10A0A024R161 153 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 DSC3Q14574 896 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 RALGPS1Q5JS13 557 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 TTC6Q86TZ1 520 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 EPB41L4BQ9H329 900 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 SLAMF8Q9P0V8 285 aa6.65□□□□□ -1.34
CLK1-214ENST00000496205 SMG5Q9UPR3 1016 aaKnown RBP6.65□□□□□ -1.34
CLK1-214ENST00000496205 PNMA6FA0A0J9YX94 578 aa6.64□□□□□ -1.35
CLK1-214ENST00000496205 PRAMEF27A3QJZ7 478 aa6.64□□□□□ -1.35
CLK1-214ENST00000496205 CBX7O95931 251 aa6.64□□□□□ -1.35
CLK1-214ENST00000496205 ZSWIM5Q9P217 1185 aa6.64□□□□□ -1.35
CLK1-214ENST00000496205 WASH4PA8MWX3 477 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 ENOX2Q16206 610 aaKnown RBP6.63□□□□□ -1.35
CLK1-214ENST00000496205 CIAPIN1Q6FI81 312 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 THAP5Q7Z6K1 395 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 CEP44Q9C0F1 390 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
CLK1-214ENST00000496205 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
CLK1-214ENST00000496205 TCAF2A6NFQ2 919 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 ESR1P03372 595 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 GLDCP23378 1020 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 GSTT1P30711 240 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 CAP2P40123 477 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 CDK8P49336 464 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 CTSWP56202 376 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 TNK2Q07912 1038 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 LRRC14Q15048 493 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 TMCO4Q5TGY1 634 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 LETMD1Q6P1Q0 360 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.62□□□□□ -1.35
CLK1-214ENST00000496205 MFSD2AQ8NA29 543 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 RGS22Q8NE09 1264 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 KCNN1Q92952 543 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
CLK1-214ENST00000496205 CCDC9Q9Y3X0 531 aaKnown RBP6.62□□□□□ -1.35
CLK1-214ENST00000496205 CELA3AP09093 270 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 HOXA5P20719 270 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 HK2P52789 917 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 MFAP1P55081 439 aaKnown RBP6.61□□□□□ -1.35
CLK1-214ENST00000496205 LINC00310P59036 64 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 PLCB3Q01970 1234 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 CCDC120Q96HB5 630 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 ADAMTS10Q9H324 1103 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 CYP8B1Q9UNU6 501 aa6.61□□□□□ -1.35
CLK1-214ENST00000496205 NUAK1O60285 661 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 RAC2P15153 192 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 TRHRP34981 398 aaPredicted RBP6.6□□□□□ -1.35
CLK1-214ENST00000496205 PRAMEF13Q5VWM6 474 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 PCNX4Q63HM2 1172 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 SCARA3Q6AZY7 606 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 CDH24Q86UP0 819 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 MYLIPQ8WY64 445 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 IRF2BPLQ9H1B7 796 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 SP110Q9HB58 689 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 TMEM59LQ9UK28 342 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
CLK1-214ENST00000496205 TREHO43280 583 aa6.59□□□□□ -1.35
CLK1-214ENST00000496205 HPXP02790 462 aa6.59□□□□□ -1.35
CLK1-214ENST00000496205 SND1Q7KZF4 910 aaKnown RBP eCLIP6.59□□□□□ -1.35
CLK1-214ENST00000496205 HDXQ7Z353 690 aa6.59□□□□□ -1.35
CLK1-214ENST00000496205 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
CLK1-214ENST00000496205 SLC26A8Q96RN1 970 aa6.59□□□□□ -1.35
CLK1-214ENST00000496205 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms