RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ASCC2Q9H1I8 757 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-214ENST00000496043 BIN2Q9UBW5 565 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-214ENST00000496043 ZBTB21Q9ULJ3 1066 aa15.43■□□□□ 0.06
PTPRF-214ENST00000496043 DOCK1Q14185 1865 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 TCRBV5S4A2TA0A5A2 114 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 TNPO2O14787 897 aaKnown RBP15.42■□□□□ 0.06
PTPRF-214ENST00000496043 GH2P01242 217 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 HOXA7P31268 230 aaPredicted RBP15.42■□□□□ 0.06
PTPRF-214ENST00000496043 PRKCZQ05513 592 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 CERKLQ49MI3 558 aaPredicted RBP15.42■□□□□ 0.06
PTPRF-214ENST00000496043 COA7Q96BR5 231 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 EDC3Q96F86 508 aaKnown RBP15.42■□□□□ 0.06
PTPRF-214ENST00000496043 HAUS7Q99871 368 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.42■□□□□ 0.064e-8■■■□□ 16.3
PTPRF-214ENST00000496043 DCTPP1Q9H773 170 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 CABP5Q9NP86 173 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 GABRQQ9UN88 632 aa15.42■□□□□ 0.06
PTPRF-214ENST00000496043 SMARCA5O60264 1052 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-214ENST00000496043 PLCD1P51178 756 aa15.41■□□□□ 0.06
PTPRF-214ENST00000496043 UBXN2AP68543 259 aa15.41■□□□□ 0.06
PTPRF-214ENST00000496043 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-214ENST00000496043 FAM110CQ1W6H9 321 aa15.41■□□□□ 0.06
PTPRF-214ENST00000496043 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
PTPRF-214ENST00000496043 P2RX7Q99572 595 aaKnown RBP15.41■□□□□ 0.06
PTPRF-214ENST00000496043 MCM9Q9NXL9 1143 aa15.41■□□□□ 0.06
PTPRF-214ENST00000496043 MYO5AQ9Y4I1 1855 aaKnown RBP15.41■□□□□ 0.06
PTPRF-214ENST00000496043 MAST2Q6P0Q8 1798 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 ADCY3O60266 1144 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 ADD2P35612 726 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 FLT3LGP49771 235 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 ABCB5Q2M3G0 1257 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 SHROOM1Q2M3G4 852 aaPredicted RBP15.4■□□□□ 0.06
PTPRF-214ENST00000496043 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
PTPRF-214ENST00000496043 ZSCAN25Q6NSZ9 544 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
PTPRF-214ENST00000496043 IRF5Q13568 498 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 RAB3GAP1Q15042 981 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 MTFR1Q15390 333 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 LCORLQ8N3X6 602 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 NKX2-3Q8TAU0 364 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 PXYLP1Q8TE99 480 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-214ENST00000496043 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
PTPRF-214ENST00000496043 KIAA0100Q14667 2235 aaKnown RBP15.38■□□□□ 0.05
PTPRF-214ENST00000496043 CCL5P13501 91 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 USP14P54578 494 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 UBE3CQ15386 1083 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 SDR42E1Q8WUS8 393 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 RNF208Q9H0X6 261 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 ATP8A2Q9NTI2 1148 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 MORF4L1Q9UBU8 362 aa15.38■□□□□ 0.05
PTPRF-214ENST00000496043 MBD4O95243 580 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 GJB1P08034 283 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 SHMT1P34896 483 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 HERVK_113P62684 666 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 GABPAQ06546 454 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-214ENST00000496043 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 FEZ1Q99689 392 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
PTPRF-214ENST00000496043 PDE4DIPQ5VU43 2346 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 PRKAB2O43741 272 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 AMOTL1Q8IY63 956 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 KIAA1683Q9H0B3 1180 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 RBPJLQ9UBG7 517 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 ZSWIM8A7E2V4 1837 aa15.36■□□□□ 0.05
PTPRF-214ENST00000496043 PTPRFP10586 1907 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 MPHOSPH10O00566 681 aaKnown RBP15.35■□□□□ 0.05
PTPRF-214ENST00000496043 ELNP15502 786 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 GJA8P48165 433 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 ZYXQ15942 572 aaKnown RBP15.35■□□□□ 0.05
PTPRF-214ENST00000496043 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
PTPRF-214ENST00000496043 ACER1Q8TDN7 264 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 GJD2Q9UKL4 321 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 PCDHB15Q9Y5E8 787 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 SIPA1L1O43166 1804 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 FOCADQ5VW36 1801 aa15.35■□□□□ 0.05
PTPRF-214ENST00000496043 CDK5RAP2Q96SN8 1893 aa15.34■□□□□ 0.05
PTPRF-214ENST00000496043 INHAP05111 366 aa15.34■□□□□ 0.05
PTPRF-214ENST00000496043 CYP2D6P10635 497 aa15.34■□□□□ 0.05
PTPRF-214ENST00000496043 CAPN2P17655 700 aa15.34■□□□□ 0.05
PTPRF-214ENST00000496043 GUCY1A2P33402 732 aa15.34■□□□□ 0.05
PTPRF-214ENST00000496043 SEPT2Q15019 361 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms