RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 TRIM65Q6PJ69 517 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 RAB11FIP4Q86YS3 637 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 ZNF654Q8IZM8 581 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
SURF1-204ENST00000495952 ARID3AQ99856 593 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 TUBB2BQ9BVA1 445 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 STRN4Q9NRL3 753 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 ZNF330Q9Y3S2 320 aaPredicted RBP11.27□□□□□ -0.61
SURF1-204ENST00000495952 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
SURF1-204ENST00000495952 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 DDAH1O94760 285 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 TOB1P50616 345 aaPredicted RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 EIF5P55010 431 aaKnown RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 SEC23AQ15436 765 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 SPECC1LQ69YQ0 1117 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 ESR2Q92731 530 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 DPF2Q92785 391 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
SURF1-204ENST00000495952 PANX2Q96RD6 677 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 CTAGE1Q96RT6 745 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 BRIP1Q9BX63 1249 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 SENP2Q9HC62 589 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
SURF1-204ENST00000495952 A0A1B0GTH6 734 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 PRPF3O43395 683 aaKnown RBP11.25□□□□□ -0.61
SURF1-204ENST00000495952 TADA3O75528 432 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 FGRP09769 529 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 FECHP22830 423 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 PPARAQ07869 468 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 FOXP4Q8IVH2 680 aaPredicted RBP11.25□□□□□ -0.61
SURF1-204ENST00000495952 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
SURF1-204ENST00000495952 FANCBQ8NB91 859 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 GSDMAQ96QA5 445 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
SURF1-204ENST00000495952 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 PHF20Q9BVI0 1012 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 UTP14AQ9BVJ6 771 aaKnown RBP11.25□□□□□ -0.61
SURF1-204ENST00000495952 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 INTS13Q9NVM9 706 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 RAI14Q9P0K7 980 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 PPP2R2CQ9Y2T4 447 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
SURF1-204ENST00000495952 DDX60LQ5H9U9 1706 aaKnown RBP11.24□□□□□ -0.61
SURF1-204ENST00000495952 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
SURF1-204ENST00000495952 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 TRIM75PA6NK02 468 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 RXRAP19793 462 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 BMP6P22004 513 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 KRT2P35908 639 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 TRAPPC10P48553 1259 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
SURF1-204ENST00000495952 TRIM14Q14142 442 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 SYNE4Q8N205 404 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 LCORLQ8N3X6 602 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 UBXN4Q92575 508 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
SURF1-204ENST00000495952 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 TACC3Q9Y6A5 838 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 SYNRGQ9UMZ2 1314 aa11.24□□□□□ -0.61
SURF1-204ENST00000495952 POLR2DO15514 142 aaKnown RBP11.23□□□□□ -0.61
SURF1-204ENST00000495952 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
SURF1-204ENST00000495952 NTSR2O95665 410 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 PDE4BQ07343 736 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 SPAG1Q07617 926 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
SURF1-204ENST00000495952 NR1I3Q14994 352 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 CDKAL1Q5VV42 579 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
SURF1-204ENST00000495952 MYL10Q9BUA6 226 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 TNKSO95271 1327 aa11.23□□□□□ -0.61
SURF1-204ENST00000495952 COL1A1P02452 1464 aaPredicted RBP11.23□□□□□ -0.61
SURF1-204ENST00000495952 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms