RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FMNL1O95466 1100 aaPredicted RBP29.29■■■□□ 2.28
HLA-C-209ENST00000495835 HMGCS2P54868 508 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 FCGRTP55899 365 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 UBE3CQ15386 1083 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 TREML2Q5T2D2 321 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 EDC3Q96F86 508 aaKnown RBP29.29■■■□□ 2.28
HLA-C-209ENST00000495835 GPATCH3Q96I76 525 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 ZNF333Q96JL9 665 aa29.29■■■□□ 2.28
HLA-C-209ENST00000495835 MYH7P12883 1935 aa29.28■■■□□ 2.28
HLA-C-209ENST00000495835 MGAMO43451 1857 aa29.28■■■□□ 2.28
HLA-C-209ENST00000495835 USP17L10C9JJH3 530 aa29.28■■■□□ 2.28
HLA-C-209ENST00000495835 SMARCA5O60264 1052 aaPredicted RBP29.28■■■□□ 2.28
HLA-C-209ENST00000495835 OSBPP22059 807 aa29.28■■■□□ 2.28
HLA-C-209ENST00000495835 GCLCP48506 637 aaPredicted RBP29.28■■■□□ 2.28
HLA-C-209ENST00000495835 ZSWIM8A7E2V4 1837 aa29.28■■■□□ 2.28
HLA-C-209ENST00000495835 DDX60LQ5H9U9 1706 aaKnown RBP29.28■■■□□ 2.28
HLA-C-209ENST00000495835 POLR3DP05423 398 aaPredicted RBP29.27■■■□□ 2.28
HLA-C-209ENST00000495835 CTGFP29279 349 aa29.27■■■□□ 2.28
HLA-C-209ENST00000495835 JAG1P78504 1218 aa29.27■■■□□ 2.28
HLA-C-209ENST00000495835 TMOD4Q9NZQ9 345 aa29.27■■■□□ 2.28
HLA-C-209ENST00000495835 NAV1Q8NEY1 1877 aa29.27■■■□□ 2.28
HLA-C-209ENST00000495835 GDF11O95390 407 aa29.26■■■□□ 2.27
HLA-C-209ENST00000495835 HOXA7P31268 230 aaPredicted RBP29.26■■■□□ 2.27
HLA-C-209ENST00000495835 FAM110CQ1W6H9 321 aa29.26■■■□□ 2.27
HLA-C-209ENST00000495835 TMEM106CQ9BVX2 250 aa29.26■■■□□ 2.27
HLA-C-209ENST00000495835 ATP8A2Q9NTI2 1148 aa29.26■■■□□ 2.27
HLA-C-209ENST00000495835 PCDHB15Q9Y5E8 787 aa29.26■■■□□ 2.27
HLA-C-209ENST00000495835 PLCD1P51178 756 aa29.25■■■□□ 2.27
HLA-C-209ENST00000495835 MTMR2Q13614 643 aa29.25■■■□□ 2.27
HLA-C-209ENST00000495835 CERKLQ49MI3 558 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-209ENST00000495835 DCP1AQ9NPI6 582 aaPredicted RBP29.25■■■□□ 2.27
HLA-C-209ENST00000495835 MCM9Q9NXL9 1143 aa29.25■■■□□ 2.27
HLA-C-209ENST00000495835 GABPAQ06546 454 aa29.24■■■□□ 2.27
HLA-C-209ENST00000495835 SLC4A8Q2Y0W8 1093 aa29.24■■■□□ 2.27
HLA-C-209ENST00000495835 LCORLQ8N3X6 602 aa29.24■■■□□ 2.27
HLA-C-209ENST00000495835 MYPNQ86TC9 1320 aa29.23■■■□□ 2.27
HLA-C-209ENST00000495835 GH2P01242 217 aa29.23■■■□□ 2.27
HLA-C-209ENST00000495835 ASCC2Q9H1I8 757 aaPredicted RBP29.23■■■□□ 2.27
HLA-C-209ENST00000495835 CABP5Q9NP86 173 aa29.23■■■□□ 2.27
HLA-C-209ENST00000495835 AAMPQ13685 434 aa29.22■■■□□ 2.27
HLA-C-209ENST00000495835 ABCB5Q2M3G0 1257 aa29.22■■■□□ 2.27
HLA-C-209ENST00000495835 RAET1EQ8TD07 263 aa29.22■■■□□ 2.27
HLA-C-209ENST00000495835 ARMT1Q9H993 441 aa29.22■■■□□ 2.27
HLA-C-209ENST00000495835 KIAA0100Q14667 2235 aaKnown RBP29.21■■■□□ 2.27
HLA-C-209ENST00000495835 SHMT1P34896 483 aa29.21■■■□□ 2.27
HLA-C-209ENST00000495835 USP17L2Q6R6M4 530 aa29.21■■■□□ 2.27
HLA-C-209ENST00000495835 SDR42E1Q8WUS8 393 aa29.21■■■□□ 2.27
HLA-C-209ENST00000495835 TTC41PQ6P2S7 1318 aa29.2■■■□□ 2.27
HLA-C-209ENST00000495835 BRCA2P51587 3418 aa29.2■■■□□ 2.27
HLA-C-209ENST00000495835 MBD4O95243 580 aa29.2■■■□□ 2.26
HLA-C-209ENST00000495835 USP14P54578 494 aa29.2■■■□□ 2.26
HLA-C-209ENST00000495835 ANKRD13CQ8N6S4 541 aa29.2■■■□□ 2.26
HLA-C-209ENST00000495835 C12orf42Q96LP6 360 aa29.2■■■□□ 2.26
HLA-C-209ENST00000495835 SWAP70Q9UH65 585 aa29.2■■■□□ 2.26
HLA-C-209ENST00000495835 POTEFA5A3E0 1075 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 GRK4P32298 578 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 IRX3P78415 501 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-209ENST00000495835 SHROOM1Q2M3G4 852 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-209ENST00000495835 AMOTL1Q8IY63 956 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 KBTBD3Q8NAB2 608 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 GTF3C2Q8WUA4 911 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-209ENST00000495835 DDRGK1Q96HY6 314 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 MORF4L1Q9UBU8 362 aa29.19■■■□□ 2.26
HLA-C-209ENST00000495835 TNPO2O14787 897 aaKnown RBP29.18■■■□□ 2.26
HLA-C-209ENST00000495835 IRF5Q13568 498 aa29.18■■■□□ 2.26
HLA-C-209ENST00000495835 SH3TC2Q8TF17 1288 aa29.18■■■□□ 2.26
HLA-C-209ENST00000495835 COA7Q96BR5 231 aa29.18■■■□□ 2.26
HLA-C-209ENST00000495835 PDE4DIPQ5VU43 2346 aa29.18■■■□□ 2.26
HLA-C-209ENST00000495835 ERC2O15083 957 aa29.17■■■□□ 2.26
HLA-C-209ENST00000495835 ZFYP08048 801 aaPredicted RBP29.17■■■□□ 2.26
HLA-C-209ENST00000495835 PRKCZQ05513 592 aa29.17■■■□□ 2.26
HLA-C-209ENST00000495835 LRRFIP1Q32MZ4 808 aaKnown RBP29.17■■■□□ 2.26
HLA-C-209ENST00000495835 SLAIN1Q8ND83 568 aa29.17■■■□□ 2.26
HLA-C-209ENST00000495835 KIAA1683Q9H0B3 1180 aa29.17■■■□□ 2.26
HLA-C-209ENST00000495835 EMILIN3Q9NT22 766 aa29.17■■■□□ 2.26
HLA-C-209ENST00000495835 ECM2O94769 699 aaPredicted RBP29.16■■■□□ 2.26
HLA-C-209ENST00000495835 RAB3GAP1Q15042 981 aa29.16■■■□□ 2.26
HLA-C-209ENST00000495835 PXYLP1Q8TE99 480 aa29.16■■■□□ 2.26
HLA-C-209ENST00000495835 YTHDC1Q96MU7 727 aaKnown RBP29.16■■■□□ 2.26
HLA-C-209ENST00000495835 CRBNQ96SW2 442 aa29.15■■■□□ 2.26
HLA-C-209ENST00000495835 PUS7LQ9H0K6 701 aaKnown RBP29.15■■■□□ 2.26
HLA-C-209ENST00000495835 PRKAB2O43741 272 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 HERVK_113P62684 666 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 UBXN2AP68543 259 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 SLFNL1Q499Z3 407 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 C12orf60Q5U649 245 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 GCC1Q96CN9 775 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 P2RX7Q99572 595 aaKnown RBP29.14■■■□□ 2.26
HLA-C-209ENST00000495835 FEZ1Q99689 392 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 GABRQQ9UN88 632 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 SLC4A4Q9Y6R1 1079 aa29.14■■■□□ 2.26
HLA-C-209ENST00000495835 BAZ2AQ9UIF9 1905 aaKnown RBP29.14■■■□□ 2.25
HLA-C-209ENST00000495835 MKI67P46013 3256 aaKnown RBP29.13■■■□□ 2.25
HLA-C-209ENST00000495835 GLRX3O76003 335 aaKnown RBP29.13■■■□□ 2.25
HLA-C-209ENST00000495835 FLT3LGP49771 235 aa29.13■■■□□ 2.25
HLA-C-209ENST00000495835 HDAC1Q13547 482 aaPredicted RBP29.13■■■□□ 2.25
HLA-C-209ENST00000495835 GIMAP6Q6P9H5 292 aa29.13■■■□□ 2.25
HLA-C-209ENST00000495835 CCDC17Q96LX7 622 aa29.13■■■□□ 2.25
HLA-C-209ENST00000495835 ZBTB47Q9UFB7 747 aaPredicted RBP29.13■■■□□ 2.25
HLA-C-209ENST00000495835 MYH8P13535 1937 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms