RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TM6SF1Q9BZW5 370 aa23.02■■□□□ 1.28
ATG3-208ENST00000495756 ZNF112Q9UJU3 913 aa23.02■■□□□ 1.28
ATG3-208ENST00000495756 USP2O75604 605 aaPredicted RBP23.01■■□□□ 1.27
ATG3-208ENST00000495756 PSMA5P28066 241 aa23.01■■□□□ 1.27
ATG3-208ENST00000495756 COL9A3Q14050 684 aaPredicted RBP23.01■■□□□ 1.27
ATG3-208ENST00000495756 FAM47AQ5JRC9 791 aa23.01■■□□□ 1.27
ATG3-208ENST00000495756 MB21D2Q8IYB1 491 aaPredicted RBP23.01■■□□□ 1.27
ATG3-208ENST00000495756 ZNF408Q9H9D4 720 aa23.01■■□□□ 1.27
ATG3-208ENST00000495756 HMGB1P09429 215 aaKnown RBP23■■□□□ 1.27
ATG3-208ENST00000495756 AKR1B1P15121 316 aa23■■□□□ 1.27
ATG3-208ENST00000495756 CASTP20810 708 aaKnown RBP23■■□□□ 1.27
ATG3-208ENST00000495756 TFAP4Q01664 338 aa23■■□□□ 1.27
ATG3-208ENST00000495756 KLRG1Q96E93 195 aa23■■□□□ 1.27
ATG3-208ENST00000495756 WRNIP1Q96S55 665 aa23■■□□□ 1.27
ATG3-208ENST00000495756 ZSWIM5Q9P217 1185 aa23■■□□□ 1.27
ATG3-208ENST00000495756 TSPY2A6NKD2 308 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 TSPY3P0CV98 308 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 TSPY8P0CW00 308 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 ABCB5Q2M3G0 1257 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 ZSWIM6Q9HCJ5 1215 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 ANGEL1Q9UNK9 670 aaKnown RBP22.99■■□□□ 1.27
ATG3-208ENST00000495756 PASKQ96RG2 1323 aa22.99■■□□□ 1.27
ATG3-208ENST00000495756 CTNND1O60716 968 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 CELF2O95319 508 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 GDF11O95390 407 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 MCM5P33992 734 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 CAP2P40123 477 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 TTLL12Q14166 644 aaPredicted RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 SHROOM1Q2M3G4 852 aaPredicted RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 BLOC1S2Q6QNY1 142 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.98■■□□□ 1.27
ATG3-208ENST00000495756 NEDD1Q8NHV4 660 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 TRPM7Q96QT4 1865 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 MPHOSPH10O00566 681 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 CPA1P15085 419 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 INPP5BP32019 993 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 IREB2P48200 963 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 JAG1P78504 1218 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 MAP3K11Q16584 847 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 MOB2Q70IA6 237 aa22.98■■□□□ 1.27
ATG3-208ENST00000495756 DHX32Q7L7V1 743 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
ATG3-208ENST00000495756 UPF3BQ9BZI7 483 aaKnown RBP22.98■■□□□ 1.27
ATG3-208ENST00000495756 PAPPA2Q9BXP8 1791 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 PLIN4Q96Q06 1357 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 GH2P01242 217 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 ANTXR2P58335 489 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 FKBP1BP68106 108 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 FSTL1Q12841 308 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 CST9Q5W186 159 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 RUFY3Q7L099 469 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 CHST3Q7LGC8 479 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 ARMC9Q7Z3E5 817 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
ATG3-208ENST00000495756 CYP46A1Q9Y6A2 500 aa22.97■■□□□ 1.27
ATG3-208ENST00000495756 PRC1O43663 620 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 RPS6KB1P23443 525 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 MAP3K9P80192 1104 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 EXOSC10Q01780 885 aaKnown RBP22.96■■□□□ 1.27
ATG3-208ENST00000495756 TMEM179Q6ZVK1 233 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 GBA2Q9HCG7 927 aaPredicted RBP22.96■■□□□ 1.27
ATG3-208ENST00000495756 CABP5Q9NP86 173 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 ZBTB21Q9ULJ3 1066 aa22.96■■□□□ 1.27
ATG3-208ENST00000495756 GREB1LQ9C091 1923 aaPredicted RBP22.96■■□□□ 1.27
ATG3-208ENST00000495756 ATAD5Q96QE3 1844 aa22.95■■□□□ 1.27
ATG3-208ENST00000495756 OTOFQ9HC10 1997 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 ASNSP08243 561 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.95■■□□□ 1.26
ATG3-208ENST00000495756 IQCA1Q86XH1 822 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 SCYL3Q8IZE3 742 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 TCEANC2Q96MN5 208 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 ZKSCAN3Q9BRR0 538 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 IL17RBQ9NRM6 502 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 GINM1Q9NU53 330 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 TCP11L1Q9NUJ3 509 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 WDR19Q8NEZ3 1342 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 DOCK1Q14185 1865 aa22.95■■□□□ 1.26
ATG3-208ENST00000495756 IGKV6D-41A0A0C4DH26 115 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 NMT2O60551 498 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 GUCY1A2P33402 732 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 VGLL4Q14135 290 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 SEPT2Q15019 361 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 RABEP1Q15276 862 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 NOL9Q5SY16 702 aaKnown RBP22.94■■□□□ 1.26
ATG3-208ENST00000495756 C2orf69Q8N8R5 385 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 UBAC1Q9BSL1 405 aa22.94■■□□□ 1.26
ATG3-208ENST00000495756 UBE2Q2LH0YL09 131 aa22.93■■□□□ 1.26
ATG3-208ENST00000495756 RAB3GAP1Q15042 981 aa22.93■■□□□ 1.26
ATG3-208ENST00000495756 LDLRAD1Q5T700 205 aa22.93■■□□□ 1.26
ATG3-208ENST00000495756 ANKRD13AQ8IZ07 590 aa22.93■■□□□ 1.26
ATG3-208ENST00000495756 ZSCAN10Q96SZ4 725 aaPredicted RBP22.93■■□□□ 1.26
ATG3-208ENST00000495756 CSADQ9Y600 493 aa22.93■■□□□ 1.26
ATG3-208ENST00000495756 NEK4P51957 841 aa22.92■■□□□ 1.26
ATG3-208ENST00000495756 SART3Q15020 963 aaKnown RBP22.92■■□□□ 1.26
ATG3-208ENST00000495756 CEP95Q96GE4 821 aa22.92■■□□□ 1.26
ATG3-208ENST00000495756 TMEM87BQ96K49 555 aa22.92■■□□□ 1.26
ATG3-208ENST00000495756 MTA3Q9BTC8 594 aa22.92■■□□□ 1.26
ATG3-208ENST00000495756 LRRC2Q9BYS8 371 aa22.92■■□□□ 1.26
ATG3-208ENST00000495756 KANSL2Q9H9L4 492 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms