RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 C19orf73Q9NVV2 129 aa8.12□□□□□ -1.11
SRRM1-219ENST00000495561 FGD1P98174 961 aa8.11□□□□□ -1.11
SRRM1-219ENST00000495561 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
SRRM1-219ENST00000495561 WIPI1Q5MNZ9 446 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-219ENST00000495561 MFSD2AQ8NA29 543 aa8.11□□□□□ -1.11
SRRM1-219ENST00000495561 CAPN6Q9Y6Q1 641 aa8.11□□□□□ -1.11
SRRM1-219ENST00000495561 H3BS24 57 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 P4HBP07237 508 aaKnown RBP8.1□□□□□ -1.11
SRRM1-219ENST00000495561 GLI1P08151 1106 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 ETF1P62495 437 aaKnown RBP8.1□□□□□ -1.11
SRRM1-219ENST00000495561 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 NPAS4Q8IUM7 802 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 HID1Q8IV36 788 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 RIN3Q8TB24 985 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 KIRREL1Q96J84 757 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 TTF2Q9UNY4 1162 aaKnown RBP8.1□□□□□ -1.11
SRRM1-219ENST00000495561 ST14Q9Y5Y6 855 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 SNCAIPQ9Y6H5 919 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 IVNS1ABPQ9Y6Y0 642 aa8.1□□□□□ -1.11
SRRM1-219ENST00000495561 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
SRRM1-219ENST00000495561 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
SRRM1-219ENST00000495561 CILP2Q8IUL8 1156 aa8.09□□□□□ -1.11
SRRM1-219ENST00000495561 GDNFP39905 211 aa8.08□□□□□ -1.12
SRRM1-219ENST00000495561 PRAMEF13Q5VWM6 474 aa8.08□□□□□ -1.12
SRRM1-219ENST00000495561 PRR23BQ6ZRT6 265 aa8.08□□□□□ -1.12
SRRM1-219ENST00000495561 KRTAP4-9Q9BYQ8 210 aa8.08□□□□□ -1.12
SRRM1-219ENST00000495561 CBX7O95931 251 aa8.07□□□□□ -1.12
SRRM1-219ENST00000495561 CST3P01034 146 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-219ENST00000495561 GRK4P32298 578 aa8.07□□□□□ -1.12
SRRM1-219ENST00000495561 TMEM67Q5HYA8 995 aa8.07□□□□□ -1.12
SRRM1-219ENST00000495561 XAGE3Q8WTP9 111 aa8.07□□□□□ -1.12
SRRM1-219ENST00000495561 TSPAN15O95858 294 aa8.06□□□□□ -1.12
SRRM1-219ENST00000495561 LDHBP07195 334 aaKnown RBP8.06□□□□□ -1.12
SRRM1-219ENST00000495561 RAP1GAPP47736 663 aa8.06□□□□□ -1.12
SRRM1-219ENST00000495561 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
SRRM1-219ENST00000495561 MPZL3Q6UWV2 235 aa8.06□□□□□ -1.12
SRRM1-219ENST00000495561 THAP5Q7Z6K1 395 aa8.06□□□□□ -1.12
SRRM1-219ENST00000495561 FRMD6Q96NE9 622 aa8.06□□□□□ -1.12
SRRM1-219ENST00000495561 GFRA2O00451 464 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 SEPT6Q14141 434 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 KRTAP19-4Q3LI73 84 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 PPP1R16BQ96T49 567 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 PCDHB5Q9Y5E4 795 aa8.05□□□□□ -1.12
SRRM1-219ENST00000495561 EIF4BP23588 611 aaKnown RBP8.04□□□□□ -1.12
SRRM1-219ENST00000495561 RPS26P62854 115 aaKnown RBP8.04□□□□□ -1.12
SRRM1-219ENST00000495561 CCDC85BQ15834 202 aaPredicted RBP8.04□□□□□ -1.12
SRRM1-219ENST00000495561 SYDE1Q6ZW31 735 aaPredicted RBP8.04□□□□□ -1.12
SRRM1-219ENST00000495561 ALPK1Q96QP1 1244 aa8.04□□□□□ -1.12
SRRM1-219ENST00000495561 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
SRRM1-219ENST00000495561 CYP7A1P22680 504 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 CFPP27918 469 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 GNA15P30679 374 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 KIR3DL1P43629 444 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 TNK2Q07912 1038 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 KCNA1Q09470 495 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 CDH24Q86UP0 819 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 CCDC120Q96HB5 630 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 COX4I2Q96KJ9 171 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 TOX2Q96NM4 488 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 TJP2Q9UDY2 1190 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
SRRM1-219ENST00000495561 C1QL4Q86Z23 238 aa8.02□□□□□ -1.13
SRRM1-219ENST00000495561 DPH2Q9BQC3 489 aaPredicted RBP8.02□□□□□ -1.13
SRRM1-219ENST00000495561 KRT1P04264 644 aa8.01□□□□□ -1.13
SRRM1-219ENST00000495561 LMNB1P20700 586 aa8.01□□□□□ -1.13
SRRM1-219ENST00000495561 AGMOQ6ZNB7 445 aa8.01□□□□□ -1.13
SRRM1-219ENST00000495561 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
SRRM1-219ENST00000495561 DIRC2Q96SL1 478 aa8.01□□□□□ -1.13
SRRM1-219ENST00000495561 ESR1P03372 595 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 PGRP06401 933 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 C1QTNF9P0C862 333 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 LIG3P49916 1009 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 MAP3K11Q16584 847 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 RALGPS1Q5JS13 557 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 TTC6Q86TZ1 520 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 ANKLE2Q86XL3 938 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 LRRC56Q8IYG6 542 aaPredicted RBP8□□□□□ -1.13
SRRM1-219ENST00000495561 TMEM87BQ96K49 555 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 NSUN3Q9H649 340 aaKnown RBP8□□□□□ -1.13
SRRM1-219ENST00000495561 RNF19AQ9NV58 838 aa8□□□□□ -1.13
SRRM1-219ENST00000495561 DNAJC25-GNG10A0A024R161 153 aa7.99□□□□□ -1.13
SRRM1-219ENST00000495561 PRPF40AO75400 957 aaKnown RBP7.99□□□□□ -1.13
SRRM1-219ENST00000495561 TMPRSS7Q7RTY8 843 aa7.99□□□□□ -1.13
SRRM1-219ENST00000495561 FBXO15Q8NCQ5 510 aaPredicted RBP7.99□□□□□ -1.13
SRRM1-219ENST00000495561 PIWIL2Q8TC59 973 aaKnown RBP7.99□□□□□ -1.13
SRRM1-219ENST00000495561 AK5Q9Y6K8 562 aa7.99□□□□□ -1.13
SRRM1-219ENST00000495561 WASH4PA8MWX3 477 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 ETV3P41162 512 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 SLC6A19Q695T7 634 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 LCNL1Q6ZST4 164 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 DNAJB8Q8NHS0 232 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 ABHD4Q8TB40 342 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 ZSCAN18Q8TBC5 510 aaPredicted RBP7.98□□□□□ -1.13
SRRM1-219ENST00000495561 Q96M66 194 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 MIR1-1HGQ9H1L0 117 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 KCNK12Q9HB15 430 aa7.98□□□□□ -1.13
SRRM1-219ENST00000495561 TMEM59LQ9UK28 342 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms