RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 LRP2BPQ9P2M1 347 aa18.46■□□□□ 0.55
NUP58-214ENST00000495460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.46■□□□□ 0.55
NUP58-214ENST00000495460 RPTORQ8N122 1335 aa18.46■□□□□ 0.55
NUP58-214ENST00000495460 EVI5O60447 810 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 TRIM27P14373 513 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 BMP8BP34820 402 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 TEX11Q8IYF3 940 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
NUP58-214ENST00000495460 A0A0C4DFX4 3053 aa18.45■□□□□ 0.54
NUP58-214ENST00000495460 HMGCS2P54868 508 aa18.44■□□□□ 0.54
NUP58-214ENST00000495460 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
NUP58-214ENST00000495460 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
NUP58-214ENST00000495460 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
NUP58-214ENST00000495460 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
NUP58-214ENST00000495460 ECM2O94769 699 aaPredicted RBP18.43■□□□□ 0.54
NUP58-214ENST00000495460 SLURP2P0DP57 97 aa18.43■□□□□ 0.54
NUP58-214ENST00000495460 MAP3K21Q5TCX8 1036 aa18.43■□□□□ 0.54
NUP58-214ENST00000495460 NAA16Q6N069 864 aaPredicted RBP18.43■□□□□ 0.54
NUP58-214ENST00000495460 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.43■□□□□ 0.54
NUP58-214ENST00000495460 HMX1Q9NP08 348 aaPredicted RBP18.43■□□□□ 0.54
NUP58-214ENST00000495460 COL6A3P12111 3177 aa18.43■□□□□ 0.54
NUP58-214ENST00000495460 ATAD5Q96QE3 1844 aa18.42■□□□□ 0.54
NUP58-214ENST00000495460 RRP1BQ14684 758 aaKnown RBP18.42■□□□□ 0.54
NUP58-214ENST00000495460 PI16Q6UXB8 463 aa18.42■□□□□ 0.54
NUP58-214ENST00000495460 SH3RF3Q8TEJ3 882 aaPredicted RBP18.42■□□□□ 0.54
NUP58-214ENST00000495460 SOCS4Q8WXH5 440 aa18.42■□□□□ 0.54
NUP58-214ENST00000495460 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
NUP58-214ENST00000495460 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 MAPK4P31152 587 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 PAWRQ96IZ0 340 aaKnown RBP18.41■□□□□ 0.54
NUP58-214ENST00000495460 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.41■□□□□ 0.54
NUP58-214ENST00000495460 OGDHLQ9ULD0 1010 aa18.41■□□□□ 0.54
NUP58-214ENST00000495460 FOCADQ5VW36 1801 aa18.4■□□□□ 0.54
NUP58-214ENST00000495460 CYP2E1P05181 493 aaPredicted RBP18.4■□□□□ 0.54
NUP58-214ENST00000495460 TNNI3KQ59H18 835 aa18.4■□□□□ 0.54
NUP58-214ENST00000495460 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
NUP58-214ENST00000495460 MS4A3Q96HJ5 214 aa18.4■□□□□ 0.54
NUP58-214ENST00000495460 FPGT-TNNI3KV9GXZ4 949 aa18.4■□□□□ 0.54
NUP58-214ENST00000495460 FAM196BA6NMK8 535 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 HERVK_113P62684 666 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 IRX3P78415 501 aaPredicted RBP18.39■□□□□ 0.53
NUP58-214ENST00000495460 USP6NLQ92738 828 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 P2RX7Q99572 595 aaKnown RBP18.39■□□□□ 0.53
NUP58-214ENST00000495460 GDF15Q99988 308 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 NUDT12Q9BQG2 462 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 FLT1P17948 1338 aa18.39■□□□□ 0.53
NUP58-214ENST00000495460 MTMR2Q13614 643 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 TATDN1Q6P1N9 297 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 EHD4Q9H223 541 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 DNAJC18Q9H819 358 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
NUP58-214ENST00000495460 RBPJLQ9UBG7 517 aa18.38■□□□□ 0.53
NUP58-214ENST00000495460 MAST2Q6P0Q8 1798 aa18.37■□□□□ 0.53
NUP58-214ENST00000495460 PLXNB2O15031 1838 aa18.37■□□□□ 0.53
NUP58-214ENST00000495460 SIPA1L1O43166 1804 aa18.37■□□□□ 0.53
NUP58-214ENST00000495460 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
NUP58-214ENST00000495460 BCAR3O75815 825 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 HLA-DOAP06340 250 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 CRACR2BQ8N4Y2 399 aaPredicted RBP18.36■□□□□ 0.53
NUP58-214ENST00000495460 TRIB2Q92519 343 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 CDK5RAP2Q96SN8 1893 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 ZBTB21Q9ULJ3 1066 aa18.36■□□□□ 0.53
NUP58-214ENST00000495460 DNAH12Q6ZR08 3092 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 ERVK-24P63145 666 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 JAG1P78504 1218 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 LRIT3Q3SXY7 679 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 MORN1Q5T089 497 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 DBNDD2Q9BQY9 259 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
NUP58-214ENST00000495460 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
NUP58-214ENST00000495460 COL6A1P12109 1028 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 RGS2P41220 211 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 USP14P54578 494 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 MAPKAPK5Q8IW41 473 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 TMEM57Q8N5G2 664 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
NUP58-214ENST00000495460 C11orf49Q9H6J7 331 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
NUP58-214ENST00000495460 GLRX3O76003 335 aaKnown RBP18.33■□□□□ 0.52
NUP58-214ENST00000495460 CCNA1P78396 465 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms