RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SOCS4Q8WXH5 440 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 APBA2Q99767 749 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 TMEM39AQ9NV64 488 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 TACC3Q9Y6A5 838 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 MTCH2Q9Y6C9 303 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 DNAH14Q0VDD8 3507 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 H7C1W4 665 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 GFRA3O60609 400 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 CSF1RP07333 972 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 RASIP1Q5U651 963 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 ZNF365Q70YC5 407 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 HERVK_113Q902F9 699 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 SLC28A3Q9HAS3 691 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 CHD8Q9HCK8 2581 aa11.41□□□□□ -0.58
GARNL3-219ENST00000495172 MAPK8IP3Q9UPT6 1336 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 CHD6Q8TD26 2715 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 DMXL1Q9Y485 3027 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 NEURL1BA8MQ27 555 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 CSF2RAP15509 400 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 CASP7P55210 303 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 HDLBPQ00341 1268 aaKnown RBP11.4□□□□□ -0.58
GARNL3-219ENST00000495172 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 PLEKHH3Q7Z736 793 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
GARNL3-219ENST00000495172 MSRAQ9UJ68 235 aa11.4□□□□□ -0.58
GARNL3-219ENST00000495172 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
GARNL3-219ENST00000495172 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-219ENST00000495172 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-219ENST00000495172 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 RRP1BQ14684 758 aaKnown RBP11.39□□□□□ -0.59
GARNL3-219ENST00000495172 LRRC41Q15345 812 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 SPRED2Q7Z698 418 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 GJD3Q8N144 294 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-219ENST00000495172 GPRC5AQ8NFJ5 357 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 HLA-CQ95604 372 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
GARNL3-219ENST00000495172 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
GARNL3-219ENST00000495172 SMCHD1A6NHR9 2005 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 UTYO14607 1347 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 CYBAP13498 195 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 HERVK_113P62684 666 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 ARRDC4Q8NCT1 418 aa11.38□□□□□ -0.59
GARNL3-219ENST00000495172 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
GARNL3-219ENST00000495172 PUS3Q9BZE2 481 aaKnown RBP11.38□□□□□ -0.59
GARNL3-219ENST00000495172 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
GARNL3-219ENST00000495172 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 IL9P15248 144 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 RGS3P49796 1198 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 ERVK-24P63145 666 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
GARNL3-219ENST00000495172 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 RAB30Q15771 203 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 SHROOM1Q2M3G4 852 aaPredicted RBP11.37□□□□□ -0.59
GARNL3-219ENST00000495172 WDR78Q5VTH9 848 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
GARNL3-219ENST00000495172 CCAR1Q8IX12 1150 aaKnown RBP11.37□□□□□ -0.59
GARNL3-219ENST00000495172 FAM178BQ8IXR5 827 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 PLA2G12BQ9BX93 195 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 COG5Q9UP83 839 aa11.37□□□□□ -0.59
GARNL3-219ENST00000495172 COL4A6Q14031 1691 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 CTNND1O60716 968 aaKnown RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 MAPK4P31152 587 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 TMPOP42166 694 aaKnown RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 FOXO4P98177 505 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 EPHA10Q5JZY3 1008 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 LENG1Q96BZ8 264 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 PPP1R12CQ9BZL4 782 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
GARNL3-219ENST00000495172 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
GARNL3-219ENST00000495172 ATRXP46100 2492 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 MED19A0JLT2 244 aaPredicted RBP11.35□□□□□ -0.59
GARNL3-219ENST00000495172 RBAK-RBAKDNI3L0D1 243 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 APBB1O00213 710 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 MSCO60682 206 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 PGK1P00558 417 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 TIMP1P01033 207 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 HOXB7P09629 217 aa11.35□□□□□ -0.59
GARNL3-219ENST00000495172 TCF15Q12870 199 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms