RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SH3D19Q5HYK7 790 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 ZSCAN25Q6NSZ9 544 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 TATDN1Q6P1N9 297 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 LCORLQ8N3X6 602 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 CPA4Q9UI42 421 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 MYH8P13535 1937 aa15.91■□□□□ 0.14
ERCC3-209ENST00000494464 CYP2C8P10632 490 aa15.91■□□□□ 0.14
ERCC3-209ENST00000494464 DCP1AQ9NPI6 582 aaPredicted RBP15.91■□□□□ 0.14
ERCC3-209ENST00000494464 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
ERCC3-209ENST00000494464 BAZ2AQ9UIF9 1905 aaKnown RBP15.91■□□□□ 0.14
ERCC3-209ENST00000494464 MBD4O95243 580 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 GDF11O95390 407 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 HMGCS2P54868 508 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 JAG1P78504 1218 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 GABPAQ06546 454 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 KBTBD3Q8NAB2 608 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 ARHGAP39Q9C0H5 1083 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 ARMT1Q9H993 441 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 PNMA3Q9UL41 463 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 CENPFP49454 3210 aa15.9■□□□□ 0.14
ERCC3-209ENST00000494464 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-209ENST00000494464 PLCD1P51178 756 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 PRMT2P55345 433 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 SOX10P56693 466 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 BACE1P56817 501 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.13
ERCC3-209ENST00000494464 HDAC1Q13547 482 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-209ENST00000494464 SHROOM1Q2M3G4 852 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-209ENST00000494464 TREML2Q5T2D2 321 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
ERCC3-209ENST00000494464 ARMC5Q96C12 935 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 ATP8A2Q9NTI2 1148 aa15.89■□□□□ 0.13
ERCC3-209ENST00000494464 SHMT1P34896 483 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 MTMR2Q13614 643 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 TSHZ3Q63HK5 1081 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
ERCC3-209ENST00000494464 GCC1Q96CN9 775 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 MCM9Q9NXL9 1143 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 PTCH2Q9Y6C5 1203 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 SALL3Q9BXA9 1300 aa15.88■□□□□ 0.13
ERCC3-209ENST00000494464 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 USP17L10C9JJH3 530 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 ERC2O15083 957 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 GH2P01242 217 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 CHGBP05060 677 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 CTGFP29279 349 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-209ENST00000494464 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-209ENST00000494464 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 TRIM47Q96LD4 638 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 GLRX3O76003 335 aaKnown RBP15.87■□□□□ 0.13
ERCC3-209ENST00000494464 ZFYP08048 801 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-209ENST00000494464 PSMC4P43686 418 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 FAM110CQ1W6H9 321 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 PUS7LQ9H0K6 701 aaKnown RBP15.87■□□□□ 0.13
ERCC3-209ENST00000494464 TMOD4Q9NZQ9 345 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 SRRDQ9UH36 339 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 SWAP70Q9UH65 585 aa15.87■□□□□ 0.13
ERCC3-209ENST00000494464 PRKAB2O43741 272 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 MX1P20591 662 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 OSBPP22059 807 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 HOXA7P31268 230 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-209ENST00000494464 GCLCP48506 637 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-209ENST00000494464 FCGRTP55899 365 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 ABCB5Q2M3G0 1257 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 LRRFIP1Q32MZ4 808 aaKnown RBP15.86■□□□□ 0.13
ERCC3-209ENST00000494464 SLC9C1Q4G0N8 1177 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 OTUD7AQ8TE49 926 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-209ENST00000494464 APPBP2Q92624 585 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 C12orf42Q96LP6 360 aa15.86■□□□□ 0.13
ERCC3-209ENST00000494464 ASCC2Q9H1I8 757 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-209ENST00000494464 HOXD10P28358 340 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 EVX2Q03828 476 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 ZNF333Q96JL9 665 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 CABP5Q9NP86 173 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
ERCC3-209ENST00000494464 SLC4A4Q9Y6R1 1079 aa15.85■□□□□ 0.13
ERCC3-209ENST00000494464 BRCA2P51587 3418 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 MYPNQ86TC9 1320 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 RNF113AO15541 343 aaKnown RBP15.84■□□□□ 0.13
ERCC3-209ENST00000494464 FMNL1O95466 1100 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-209ENST00000494464 CYP2D6P10635 497 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 USP14P54578 494 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 RAB3GAP1Q15042 981 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 C12orf60Q5U649 245 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 KIAA1683Q9H0B3 1180 aa15.84■□□□□ 0.13
ERCC3-209ENST00000494464 ARPP21Q9UBL0 812 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-209ENST00000494464 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-209ENST00000494464 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 GIMAP6Q6P9H5 292 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 ANKRD13CQ8N6S4 541 aa15.83■□□□□ 0.12
ERCC3-209ENST00000494464 SLC44A5Q8NCS7 719 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms