RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CPA4Q9UI42 421 aa26.36■■□□□ 1.81
HPS3-207ENST00000494327 ZBTB21Q9ULJ3 1066 aa26.36■■□□□ 1.81
HPS3-207ENST00000494327 ECM2O94769 699 aaPredicted RBP26.35■■□□□ 1.81
HPS3-207ENST00000494327 GH2P01242 217 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 ZFYP08048 801 aaPredicted RBP26.35■■□□□ 1.81
HPS3-207ENST00000494327 CYP2C8P10632 490 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 HMGCS2P54868 508 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 LRRFIP1Q32MZ4 808 aaKnown RBP26.35■■□□□ 1.81
HPS3-207ENST00000494327 CERKLQ49MI3 558 aaPredicted RBP26.35■■□□□ 1.81
HPS3-207ENST00000494327 TATDN1Q6P1N9 297 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 APPBP2Q92624 585 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 OSBP2Q969R2 916 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 DDRGK1Q96HY6 314 aa26.35■■□□□ 1.81
HPS3-207ENST00000494327 PARK7Q99497 189 aaKnown RBP26.35■■□□□ 1.81
HPS3-207ENST00000494327 PDE1AP54750 535 aa26.34■■□□□ 1.81
HPS3-207ENST00000494327 GINM1Q9NU53 330 aa26.34■■□□□ 1.81
HPS3-207ENST00000494327 SHMT1P34896 483 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 OTOP1Q7RTM1 612 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 AMOTL1Q8IY63 956 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 STRBPQ96SI9 672 aaKnown RBP26.33■■□□□ 1.81
HPS3-207ENST00000494327 WDR18Q9BV38 432 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 EFCC1Q9HA90 598 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 STAP2Q9UGK3 403 aa26.33■■□□□ 1.81
HPS3-207ENST00000494327 USP17L12C9JPN9 530 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 USP17L21D6R901 530 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 GABPAQ06546 454 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 MTMR2Q13614 643 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 RAB3GAP1Q15042 981 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 ABCB5Q2M3G0 1257 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 TREML2Q5T2D2 321 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 C17orf99Q6UX52 265 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 DYNLL2Q96FJ2 89 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 CABP5Q9NP86 173 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 AGTPBP1Q9UPW5 1226 aa26.32■■□□□ 1.8
HPS3-207ENST00000494327 PHIPQ8WWQ0 1821 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 ATAD5Q96QE3 1844 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 CYP2D7A0A087X1C5 515 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 M0R2C6 588 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 CAP1Q01518 475 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 KIF22Q14807 665 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 FBXO46Q6PJ61 603 aaPredicted RBP26.31■■□□□ 1.8
HPS3-207ENST00000494327 CHD1LQ86WJ1 897 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 PROCA1Q8NCQ7 364 aaPredicted RBP26.31■■□□□ 1.8
HPS3-207ENST00000494327 HPS5Q9UPZ3 1129 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 NAV1Q8NEY1 1877 aa26.31■■□□□ 1.8
HPS3-207ENST00000494327 MYH7P12883 1935 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 USP17L10C9JJH3 530 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 MPHOSPH10O00566 681 aaKnown RBP26.3■■□□□ 1.8
HPS3-207ENST00000494327 BACE1P56817 501 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 SLC44A5Q8NCS7 719 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 TMOD4Q9NZQ9 345 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 SLC45A1Q9Y2W3 748 aa26.3■■□□□ 1.8
HPS3-207ENST00000494327 SMIM22K7EJ46 135 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 GPAA1O43292 621 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 NUCB1Q02818 461 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 ARHGEF6Q15052 776 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 SH3D19Q5HYK7 790 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 C12orf60Q5U649 245 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 CTR9Q6PD62 1173 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 SMCR8Q8TEV9 937 aaPredicted RBP26.29■■□□□ 1.8
HPS3-207ENST00000494327 SEC62Q99442 399 aaKnown RBP26.29■■□□□ 1.8
HPS3-207ENST00000494327 ARHGAP39Q9C0H5 1083 aa26.29■■□□□ 1.8
HPS3-207ENST00000494327 DDX60LQ5H9U9 1706 aaKnown RBP26.28■■□□□ 1.8
HPS3-207ENST00000494327 APPP05067 770 aa26.28■■□□□ 1.8
HPS3-207ENST00000494327 LACTBP83111 547 aaPredicted RBP26.28■■□□□ 1.8
HPS3-207ENST00000494327 EVI5LQ96CN4 794 aa26.28■■□□□ 1.8
HPS3-207ENST00000494327 SWAP70Q9UH65 585 aa26.28■■□□□ 1.8
HPS3-207ENST00000494327 ADGRA2Q96PE1 1338 aa26.28■■□□□ 1.8
HPS3-207ENST00000494327 GSG1L2A8MUP6 293 aa26.27■■□□□ 1.8
HPS3-207ENST00000494327 C19orf81C9J6K1 198 aa26.27■■□□□ 1.8
HPS3-207ENST00000494327 FEZ1Q99689 392 aa26.27■■□□□ 1.8
HPS3-207ENST00000494327 PNMA3Q9UL41 463 aa26.27■■□□□ 1.8
HPS3-207ENST00000494327 OSBPP22059 807 aa26.26■■□□□ 1.79
HPS3-207ENST00000494327 PABPC4Q13310 644 aaKnown RBP eCLIP26.26■■□□□ 1.79
HPS3-207ENST00000494327 SEPT2Q15019 361 aa26.26■■□□□ 1.79
HPS3-207ENST00000494327 ZYXQ15942 572 aaKnown RBP26.26■■□□□ 1.79
HPS3-207ENST00000494327 ZMYM1Q5SVZ6 1142 aa26.26■■□□□ 1.79
HPS3-207ENST00000494327 PTPN22Q9Y2R2 807 aa26.26■■□□□ 1.79
HPS3-207ENST00000494327 TRIM6-TRIM34B2RNG4 842 aa26.25■■□□□ 1.79
HPS3-207ENST00000494327 GNAT2P19087 354 aa26.25■■□□□ 1.79
HPS3-207ENST00000494327 CDK8P49336 464 aa26.25■■□□□ 1.79
HPS3-207ENST00000494327 STK11IPQ8N1F8 1099 aa26.25■■□□□ 1.79
HPS3-207ENST00000494327 ARPP21Q9UBL0 812 aaPredicted RBP26.25■■□□□ 1.79
HPS3-207ENST00000494327 MINDY4BA8MYZ0 360 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 BCRP11274 1271 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 GUCY1A2P33402 732 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 PSMC4P43686 418 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 USP17L2Q6R6M4 530 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 PLEKHM2Q8IWE5 1019 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 RILPL2Q969X0 211 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 PTPRFP10586 1907 aa26.24■■□□□ 1.79
HPS3-207ENST00000494327 PATL2C9JE40 543 aaKnown RBP26.23■■□□□ 1.79
HPS3-207ENST00000494327 FMNL1O95466 1100 aaPredicted RBP26.23■■□□□ 1.79
HPS3-207ENST00000494327 TDO2P48775 406 aa26.23■■□□□ 1.79
HPS3-207ENST00000494327 GIMAP6Q6P9H5 292 aa26.23■■□□□ 1.79
HPS3-207ENST00000494327 ACER1Q8TDN7 264 aa26.23■■□□□ 1.79
HPS3-207ENST00000494327 ASCC2Q9H1I8 757 aaPredicted RBP26.23■■□□□ 1.79
HPS3-207ENST00000494327 EMILIN3Q9NT22 766 aa26.23■■□□□ 1.79
HPS3-207ENST00000494327 BAZ2AQ9UIF9 1905 aaKnown RBP26.22■■□□□ 1.79
HPS3-207ENST00000494327 AKR1B1P15121 316 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms