RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 PLCB3Q01970 1234 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CALCRLQ16602 461 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 V9GYY5 206 aaPredicted RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CETN3O15182 167 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CIAO1O76071 339 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 MYZAPP0CAP1 466 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 RXRBP28702 533 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CHURC1Q8WUH1 139 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 PPP1R2P41236 205 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 DNM3Q9UQ16 869 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 XDHP47989 1333 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 FSD2A1L4K1 749 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 RRP9O43818 475 aaKnown RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 GPR162Q16538 588 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 SEPT12Q8IYM1 358 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-204ENST00000494183 IGSF22Q8N9C0 903 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 MLKLQ8NB16 471 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 TBC1D7Q9P0N9 293 aa13.1□□□□□ -0.31
COL25A1-204ENST00000494183 TMEM110-MUSTN1A8MSY1 372 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 CYP21A2P08686 494 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
COL25A1-204ENST00000494183 LEMD3Q9Y2U8 911 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 ABCC3O15438 1527 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 AKR1B15C9JRZ8 316 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-204ENST00000494183 PRPHP41219 470 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 ZMYM1Q5SVZ6 1142 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-204ENST00000494183 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-204ENST00000494183 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
COL25A1-204ENST00000494183 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 PPP1R9BQ96SB3 815 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 CEP83Q9Y592 693 aa13.09□□□□□ -0.31
COL25A1-204ENST00000494183 KDM5CP41229 1560 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 BBOX1O75936 387 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 MCM6Q14566 821 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 CABP7Q86V35 215 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 CAPZA3Q96KX2 299 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.31
COL25A1-204ENST00000494183 CHD1O14646 1710 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 PFKFB2O60825 505 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 LMAN1P49257 510 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 ICA1Q05084 483 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 POSTNQ15063 836 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 ARFGAP3Q9NP61 516 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 GPHNQ9NQX3 736 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-204ENST00000494183 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 CSADQ9Y600 493 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 PAK1Q13153 545 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-204ENST00000494183 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-204ENST00000494183 SYT10Q6XYQ8 523 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 ZNF589Q86UQ0 364 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-204ENST00000494183 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
COL25A1-204ENST00000494183 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 FANCCQ00597 558 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 PKP1Q13835 747 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 CCDC122Q5T0U0 273 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
COL25A1-204ENST00000494183 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 ALAS1P13196 640 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 CLCN1P35523 988 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
COL25A1-204ENST00000494183 INF2Q27J81 1249 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 ZNF354CQ86Y25 554 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 CBX8Q9HC52 389 aa13.07□□□□□ -0.32
COL25A1-204ENST00000494183 DKC1O60832 514 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL25A1-204ENST00000494183 PDIA3P30101 505 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms