RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-231	ENST00000494043	SCAF8	Q9UPN6	1271 aa	Known RBP	13.43	□□□□□ -0.26
MCF2L-231	ENST00000494043	PPP2R3B	Q9Y5P8	575 aa		13.43	□□□□□ -0.26
MCF2L-231	ENST00000494043	PLIN4	Q96Q06	1357 aa		13.43	□□□□□ -0.26
MCF2L-231	ENST00000494043	FAM196B	A6NMK8	535 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	IFIT3	O14879	490 aa	Known RBP	13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TBC1D12	O60347	775 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TSPY3	P0CV98	308 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TSPY8	P0CW00	308 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	SLURP2	P0DP57	97 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TFAP4	Q01664	338 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TMEM67	Q5HYA8	995 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	IQCA1	Q86XH1	822 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	IGDCC4	Q8TDY8	1250 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	ZC3H15	Q8WU90	426 aa	Known RBP	13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	BRF1	Q92994	677 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	IPO9	Q96P70	1041 aa	Known RBP	13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	GPHN	Q9NQX3	736 aa	Predicted RBP	13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	ANGEL1	Q9UNK9	670 aa	Known RBP	13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	LIMCH1	Q9UPQ0	1083 aa		13.42	□□□□□ -0.26
MCF2L-231	ENST00000494043	TNKS	O95271	1327 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	ERICH2	A1L162	156 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	SEC23A	Q15436	765 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	TATDN1	Q6P1N9	297 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	PNMA8A	Q86V59	439 aa	Predicted RBP	13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	NEDD1	Q8NHV4	660 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	DCPS	Q96C86	337 aa	Known RBP	13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	ZKSCAN3	Q9BRR0	538 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	LARP6	Q9BRS8	491 aa	Known RBP	13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	2e-7	■■■■□ 25.3
MCF2L-231	ENST00000494043	LY9	Q9HBG7	655 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	TCP11L1	Q9NUJ3	509 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	TPCN1	Q9ULQ1	816 aa		13.41	□□□□□ -0.26
MCF2L-231	ENST00000494043	AKR1B1	P15121	316 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	LIFR	P42702	1097 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	EVC	P57679	992 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	MAP3K10	Q02779	954 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	APOBR	Q0VD83	1088 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	WTAP	Q15007	396 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	CERKL	Q49MI3	558 aa	Predicted RBP	13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	EAPP	Q56P03	285 aa	Predicted RBP	13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	CCDC178	Q5BJE1	867 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	SGMS1	Q86VZ5	419 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	SULF1	Q8IWU6	871 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	ENAH	Q8N8S7	591 aa	Predicted RBP	13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	TMX3	Q96JJ7	454 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	CCDC17	Q96LX7	622 aa		13.4	□□□□□ -0.26
MCF2L-231	ENST00000494043	MYH8	P13535	1937 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	NMT2	O60551	498 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	LARGE1	O95461	756 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	VEGFA	P15692	232 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	TMTC2	Q8N394	836 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	HOOK2	Q96ED9	719 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	SENP2	Q9HC62	589 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	IL17RB	Q9NRM6	502 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	DAXX	Q9UER7	740 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	SSC5D	A1L4H1	1573 aa		13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	GREB1L	Q9C091	1923 aa	Predicted RBP	13.39	□□□□□ -0.27
MCF2L-231	ENST00000494043	IGKV6D-41	A0A0C4DH26	115 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	KLF18	A0A0U1RQI7	1052 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	ADM5	C9JUS6	153 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	SLC4A3	P48751	1232 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	RRP1B	Q14684	758 aa	Known RBP	13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	ME3	Q16798	604 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	IFIT1B	Q5T764	474 aa	Known RBP	13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	DCAF15	Q66K64	600 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	RCSD1	Q6JBY9	416 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	NFXL1	Q6ZNB6	911 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	MIGA2	Q7L4E1	593 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	KRT26	Q7Z3Y9	468 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	DGKH	Q86XP1	1220 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	ANKS1A	Q92625	1134 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	ZNF274	Q96GC6	653 aa	Predicted RBP	13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	RRAGC	Q9HB90	399 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	BRPF3	Q9ULD4	1205 aa		13.38	□□□□□ -0.27
MCF2L-231	ENST00000494043	CCDC69	A6NI79	296 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	GOLGA8B	A8MQT2	603 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	MPHOSPH10	O00566	681 aa	Known RBP	13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	GDF11	O95390	407 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	NOV	P48745	357 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	CUL4A	Q13619	759 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	ABCB5	Q2M3G0	1257 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	SUPT20HL1	Q3ZLR7	823 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	PRAMEF18	Q5VWM3	479 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	APOA5	Q6Q788	366 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	PPP4R3CP	Q6ZMV5	832 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	TMEM179	Q6ZVK1	233 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	CEP95	Q96GE4	821 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	NMRK2	Q9NPI5	230 aa		13.37	□□□□□ -0.27
MCF2L-231	ENST00000494043	PHF20L1	A8MW92	1017 aa		13.36	□□□□□ -0.27
MCF2L-231	ENST00000494043	PFKFB2	O60825	505 aa		13.36	□□□□□ -0.27
MCF2L-231	ENST00000494043	POTEI	P0CG38	1075 aa		13.36	□□□□□ -0.27
MCF2L-231	ENST00000494043	POTEJ	P0CG39	1038 aa		13.36	□□□□□ -0.27
MCF2L-231	ENST00000494043	PDIA3	P30101	505 aa	Known RBP	13.36	□□□□□ -0.27
MCF2L-231	ENST00000494043	ST3GAL1	Q11201	340 aa		13.36	□□□□□ -0.27

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