RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ZBTB21Q9ULJ3 1066 aa28.77■■■□□ 2.2
RHBDD3-206ENST00000493894 SLC34A2O95436 690 aa28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 GCLCP48506 637 aaPredicted RBP28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 DNAJC2Q99543 621 aaKnown RBP28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 BCL11AQ9H165 835 aa28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 TMOD4Q9NZQ9 345 aa28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 BIN2Q9UBW5 565 aaPredicted RBP28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 GABRQQ9UN88 632 aa28.76■■■□□ 2.19
RHBDD3-206ENST00000493894 BACE1P56817 501 aa28.75■■■□□ 2.19
RHBDD3-206ENST00000493894 UBXN2AP68543 259 aa28.75■■■□□ 2.19
RHBDD3-206ENST00000493894 JAG1P78504 1218 aa28.75■■■□□ 2.19
RHBDD3-206ENST00000493894 MTFR1Q15390 333 aa28.75■■■□□ 2.19
RHBDD3-206ENST00000493894 ASCC2Q9H1I8 757 aaPredicted RBP28.75■■■□□ 2.19
RHBDD3-206ENST00000493894 DDX60LQ5H9U9 1706 aaKnown RBP28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 PDE3AQ14432 1141 aa28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 SHROOM1Q2M3G4 852 aaPredicted RBP28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 SLC9C2Q5TAH2 1124 aa28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 RIOK1Q9BRS2 568 aaKnown RBP28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 EHD4Q9H223 541 aa28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 SERPINB13Q9UIV8 391 aa28.74■■■□□ 2.19
RHBDD3-206ENST00000493894 MAGEB6P1A0A0J9YX57 407 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 C19orf81C9J6K1 198 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 GOLIM4O00461 696 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 PDE6AP16499 860 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 FLT3LGP49771 235 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 IRX3P78415 501 aaPredicted RBP28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 TTC6Q86TZ1 520 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 NAV1Q8NEY1 1877 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 COA7Q96BR5 231 aa28.73■■■□□ 2.19
RHBDD3-206ENST00000493894 USP17L10C9JJH3 530 aa28.72■■■□□ 2.19
RHBDD3-206ENST00000493894 ADCY3O60266 1144 aa28.72■■■□□ 2.19
RHBDD3-206ENST00000493894 NKX2-3Q8TAU0 364 aa28.72■■■□□ 2.19
RHBDD3-206ENST00000493894 CCL5P13501 91 aa28.71■■■□□ 2.19
RHBDD3-206ENST00000493894 IRF5Q13568 498 aa28.71■■■□□ 2.19
RHBDD3-206ENST00000493894 C20orf194Q5TEA3 1177 aa28.71■■■□□ 2.19
RHBDD3-206ENST00000493894 TATDN1Q6P1N9 297 aa28.71■■■□□ 2.19
RHBDD3-206ENST00000493894 CRNKL1Q9BZJ0 848 aaKnown RBP28.71■■■□□ 2.19
RHBDD3-206ENST00000493894 GH2P01242 217 aa28.7■■■□□ 2.18
RHBDD3-206ENST00000493894 RNF208Q9H0X6 261 aa28.7■■■□□ 2.18
RHBDD3-206ENST00000493894 ZNF532Q9HCE3 1301 aa28.69■■■□□ 2.18
RHBDD3-206ENST00000493894 HOXA7P31268 230 aaPredicted RBP28.69■■■□□ 2.18
RHBDD3-206ENST00000493894 PXYLP1Q8TE99 480 aa28.69■■■□□ 2.18
RHBDD3-206ENST00000493894 SHISA4Q96DD7 197 aa28.69■■■□□ 2.18
RHBDD3-206ENST00000493894 TAOK2Q9UL54 1235 aa28.69■■■□□ 2.18
RHBDD3-206ENST00000493894 GJB1P08034 283 aa28.68■■■□□ 2.18
RHBDD3-206ENST00000493894 ELNP15502 786 aa28.68■■■□□ 2.18
RHBDD3-206ENST00000493894 GCC1Q96CN9 775 aa28.68■■■□□ 2.18
RHBDD3-206ENST00000493894 PAG1Q9NWQ8 432 aa28.68■■■□□ 2.18
RHBDD3-206ENST00000493894 POLR3DP05423 398 aaPredicted RBP28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 GJA8P48165 433 aa28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 EDC3Q96F86 508 aaKnown RBP28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 FEZ1Q99689 392 aa28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 BOLA2Q9H3K6 86 aa28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 MORF4L1Q9UBU8 362 aa28.67■■■□□ 2.18
RHBDD3-206ENST00000493894 TCRBV5S4A2TA0A5A2 114 aa28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 INHAP05111 366 aa28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 ATP5JP18859 108 aa28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 CERKLQ49MI3 558 aaPredicted RBP28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 USP17L2Q6R6M4 530 aa28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 LRRCC1Q9C099 1032 aa28.66■■■□□ 2.18
RHBDD3-206ENST00000493894 HERVK_113P62684 666 aa28.65■■■□□ 2.18
RHBDD3-206ENST00000493894 ABCB5Q2M3G0 1257 aa28.65■■■□□ 2.18
RHBDD3-206ENST00000493894 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.65■■■□□ 2.18
RHBDD3-206ENST00000493894 UNC93B1Q9H1C4 597 aa28.65■■■□□ 2.18
RHBDD3-206ENST00000493894 MCM9Q9NXL9 1143 aa28.65■■■□□ 2.18
RHBDD3-206ENST00000493894 PLCD1P51178 756 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 RAB3GAP1Q15042 981 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 LCORLQ8N3X6 602 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 P2RX7Q99572 595 aaKnown RBP28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 HAUS7Q99871 368 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 CABP5Q9NP86 173 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 EMILIN3Q9NT22 766 aa28.64■■■□□ 2.18
RHBDD3-206ENST00000493894 SHMT1P34896 483 aa28.63■■■□□ 2.17
RHBDD3-206ENST00000493894 GTF3C2Q8WUA4 911 aaPredicted RBP28.63■■■□□ 2.17
RHBDD3-206ENST00000493894 SDR42E1Q8WUS8 393 aa28.63■■■□□ 2.17
RHBDD3-206ENST00000493894 C12orf42Q96LP6 360 aa28.63■■■□□ 2.17
RHBDD3-206ENST00000493894 ADD2P35612 726 aa28.62■■■□□ 2.17
RHBDD3-206ENST00000493894 USP14P54578 494 aa28.62■■■□□ 2.17
RHBDD3-206ENST00000493894 ZYXQ15942 572 aaKnown RBP28.62■■■□□ 2.17
RHBDD3-206ENST00000493894 GPRC5AQ8NFJ5 357 aa28.62■■■□□ 2.17
RHBDD3-206ENST00000493894 U2AF1L4Q8WU68 220 aaKnown RBP28.62■■■□□ 2.17
RHBDD3-206ENST00000493894 DOCK3Q8IZD9 2030 aa28.61■■■□□ 2.17
RHBDD3-206ENST00000493894 ARMT1Q9H993 441 aa28.61■■■□□ 2.17
RHBDD3-206ENST00000493894 DCP1AQ9NPI6 582 aaPredicted RBP28.61■■■□□ 2.17
RHBDD3-206ENST00000493894 GABPAQ06546 454 aa28.6■■■□□ 2.17
RHBDD3-206ENST00000493894 KIAA1683Q9H0B3 1180 aa28.6■■■□□ 2.17
RHBDD3-206ENST00000493894 TXNRD2Q9NNW7 524 aa28.6■■■□□ 2.17
RHBDD3-206ENST00000493894 MBD4O95243 580 aa28.59■■■□□ 2.17
RHBDD3-206ENST00000493894 MYH7P12883 1935 aa28.59■■■□□ 2.17
RHBDD3-206ENST00000493894 SMARCA5O60264 1052 aaPredicted RBP28.58■■■□□ 2.17
RHBDD3-206ENST00000493894 HMGCRP04035 888 aa28.58■■■□□ 2.17
RHBDD3-206ENST00000493894 PAGR1Q9BTK6 254 aa28.58■■■□□ 2.17
RHBDD3-206ENST00000493894 GJD2Q9UKL4 321 aa28.58■■■□□ 2.17
RHBDD3-206ENST00000493894 USP17L15C9J2P7 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L13C9JLJ4 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L11C9JVI0 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L18D6R9N7 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L22D6RA61 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L17D6RBQ6 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L19D6RCP7 530 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms