RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 GDF11O95390 407 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 CHGBP05060 677 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 PROCA1Q8NCQ7 364 aaPredicted RBP21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 APPBP2Q92624 585 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 WDR18Q9BV38 432 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 STAP2Q9UGK3 403 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 ZBTB21Q9ULJ3 1066 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 SLC4A4Q9Y6R1 1079 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 PTPRFP10586 1907 aa21.67■■□□□ 1.06
GTF3C2-212ENST00000493511 PRKAB2O43741 272 aa21.66■■□□□ 1.06
GTF3C2-212ENST00000493511 CERKLQ49MI3 558 aaPredicted RBP21.66■■□□□ 1.06
GTF3C2-212ENST00000493511 CD99L2Q8TCZ2 262 aa21.66■■□□□ 1.06
GTF3C2-212ENST00000493511 FSD1Q9BTV5 496 aa21.66■■□□□ 1.06
GTF3C2-212ENST00000493511 IGHDP01880 384 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 PDE1AP54750 535 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 LNPKQ9C0E8 428 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 AGTPBP1Q9UPW5 1226 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 CENPFP49454 3210 aa21.65■■□□□ 1.06
GTF3C2-212ENST00000493511 GH2P01242 217 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 HMGCS2P54868 508 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 BACE1P56817 501 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 JAG1P78504 1218 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 GABPAQ06546 454 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 PABPC4Q13310 644 aaKnown RBP eCLIP21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 KIF22Q14807 665 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 B4GALNT3Q6L9W6 998 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 FBXO46Q6PJ61 603 aaPredicted RBP21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 OTOP1Q7RTM1 612 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 OSBP2Q969R2 916 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 STRBPQ96SI9 672 aaKnown RBP21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 EFCC1Q9HA90 598 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 CABP5Q9NP86 173 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 SWAP70Q9UH65 585 aa21.64■■□□□ 1.05
GTF3C2-212ENST00000493511 CCDC85CA6NKD9 419 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 CYP2C8P10632 490 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 GNAT2P19087 354 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 SHMT1P34896 483 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 ABCB5Q2M3G0 1257 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 SH3D19Q5HYK7 790 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 C17orf99Q6UX52 265 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 CHD1LQ86WJ1 897 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 PNMA3Q9UL41 463 aa21.63■■□□□ 1.05
GTF3C2-212ENST00000493511 ADGRA2Q96PE1 1338 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 C19orf81C9J6K1 198 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 USP17L10C9JJH3 530 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 NUCB1Q02818 461 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 MTMR2Q13614 643 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 GIMAP6Q6P9H5 292 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 SMCR8Q8TEV9 937 aaPredicted RBP21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 TMOD4Q9NZQ9 345 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 CPA4Q9UI42 421 aa21.62■■□□□ 1.05
GTF3C2-212ENST00000493511 USP17L12C9JPN9 530 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 USP17L21D6R901 530 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 GPAA1O43292 621 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 CYP2D6P10635 497 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 LACTBP83111 547 aaPredicted RBP21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 TREML2Q5T2D2 321 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 C12orf60Q5U649 245 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 ARPP21Q9UBL0 812 aaPredicted RBP21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 HPS5Q9UPZ3 1129 aa21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 BAZ2AQ9UIF9 1905 aaKnown RBP21.61■■□□□ 1.05
GTF3C2-212ENST00000493511 GNRH1P01148 92 aa21.6■■□□□ 1.05
GTF3C2-212ENST00000493511 LOC285556D6RIA3 1793 aa21.6■■□□□ 1.05
GTF3C2-212ENST00000493511 MPHOSPH10O00566 681 aaKnown RBP21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 EVX2Q03828 476 aa21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 CTR9Q6PD62 1173 aa21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 TICAM2Q86XR7 235 aa21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 FEZ1Q99689 392 aa21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 PTPN22Q9Y2R2 807 aa21.59■■□□□ 1.05
GTF3C2-212ENST00000493511 GSG1L2A8MUP6 293 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 M0R2C6 588 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 BCRP11274 1271 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 OSBPP22059 807 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 ZMYM1Q5SVZ6 1142 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 DYNLL2Q96FJ2 89 aa21.58■■□□□ 1.05
GTF3C2-212ENST00000493511 CYP2D7A0A087X1C5 515 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 APPP05067 770 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 USP14P54578 494 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 SBK1Q52WX2 424 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 C16orf86Q6ZW13 317 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 SLC44A5Q8NCS7 719 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 CCDC17Q96LX7 622 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 NACAP1Q9BZK3 213 aa21.57■■□□□ 1.04
GTF3C2-212ENST00000493511 GCLCP48506 637 aaPredicted RBP21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 TDO2P48775 406 aa21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 CDK8P49336 464 aa21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 IRX3P78415 501 aaPredicted RBP21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 KIAA1683Q9H0B3 1180 aa21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 ASCC2Q9H1I8 757 aaPredicted RBP21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 OSBPL3Q9H4L5 887 aa21.56■■□□□ 1.04
GTF3C2-212ENST00000493511 TRIM6-TRIM34B2RNG4 842 aa21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 PATL2C9JE40 543 aaKnown RBP21.55■■□□□ 1.04
GTF3C2-212ENST00000493511 HOXA7P31268 230 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms