RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 BIN2Q9UBW5 565 aaPredicted RBP26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 TMED8Q6PL24 325 aaPredicted RBP26.96■■□□□ 1.91
LYSMD4-208ENST00000493256 CLASRPQ8N2M8 674 aaKnown RBP26.96■■□□□ 1.91
LYSMD4-208ENST00000493256 SHISA4Q96DD7 197 aa26.96■■□□□ 1.91
LYSMD4-208ENST00000493256 ZBTB21Q9ULJ3 1066 aa26.96■■□□□ 1.91
LYSMD4-208ENST00000493256 CCL5P13501 91 aa26.95■■□□□ 1.9
LYSMD4-208ENST00000493256 BACE1P56817 501 aa26.95■■□□□ 1.9
LYSMD4-208ENST00000493256 GINM1Q9NU53 330 aa26.95■■□□□ 1.9
LYSMD4-208ENST00000493256 ADCY3O60266 1144 aa26.94■■□□□ 1.9
LYSMD4-208ENST00000493256 GCLCP48506 637 aaPredicted RBP26.94■■□□□ 1.9
LYSMD4-208ENST00000493256 UBXN2AP68543 259 aa26.94■■□□□ 1.9
LYSMD4-208ENST00000493256 TTF1Q15361 905 aaPredicted RBP26.94■■□□□ 1.9
LYSMD4-208ENST00000493256 RIOK1Q9BRS2 568 aaKnown RBP26.94■■□□□ 1.9
LYSMD4-208ENST00000493256 IFIT2P09913 472 aaKnown RBP26.93■■□□□ 1.9
LYSMD4-208ENST00000493256 IRF5Q13568 498 aa26.93■■□□□ 1.9
LYSMD4-208ENST00000493256 TMOD4Q9NZQ9 345 aa26.93■■□□□ 1.9
LYSMD4-208ENST00000493256 CEP290O15078 2479 aa26.93■■□□□ 1.9
LYSMD4-208ENST00000493256 RAB11FIP3O75154 756 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 GJB1P08034 283 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 ELNP15502 786 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 COA7Q96BR5 231 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 RNF208Q9H0X6 261 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 BCL11AQ9H165 835 aa26.92■■□□□ 1.9
LYSMD4-208ENST00000493256 DDX60LQ5H9U9 1706 aaKnown RBP26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 C19orf81C9J6K1 198 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 USP17L10C9JJH3 530 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 GH2P01242 217 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 PDE6AP16499 860 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 GJA8P48165 433 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 SLC9C2Q5TAH2 1124 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 TATDN1Q6P1N9 297 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 NKX2-3Q8TAU0 364 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 DNAJC2Q99543 621 aaKnown RBP26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 EHD4Q9H223 541 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 CHMP4BQ9H444 224 aaKnown RBP26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 SERPINB13Q9UIV8 391 aa26.91■■□□□ 1.9
LYSMD4-208ENST00000493256 GOLIM4O00461 696 aa26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 HOXA7P31268 230 aaPredicted RBP26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 IRX3P78415 501 aaPredicted RBP26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 C20orf194Q5TEA3 1177 aa26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 PXYLP1Q8TE99 480 aa26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 UNC93B1Q9H1C4 597 aa26.9■■□□□ 1.9
LYSMD4-208ENST00000493256 MAGEB6P1A0A0J9YX57 407 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 INHAP05111 366 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 TTC6Q86TZ1 520 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 GCC1Q96CN9 775 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 EDC3Q96F86 508 aaKnown RBP26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 P2RX7Q99572 595 aaKnown RBP26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 MORF4L1Q9UBU8 362 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 TAOK2Q9UL54 1235 aa26.89■■□□□ 1.9
LYSMD4-208ENST00000493256 NAV1Q8NEY1 1877 aa26.89■■□□□ 1.89
LYSMD4-208ENST00000493256 ZNF532Q9HCE3 1301 aa26.88■■□□□ 1.89
LYSMD4-208ENST00000493256 TCRBV5S4A2TA0A5A2 114 aa26.87■■□□□ 1.89
LYSMD4-208ENST00000493256 PLCD1P51178 756 aa26.87■■□□□ 1.89
LYSMD4-208ENST00000493256 EMILIN3Q9NT22 766 aa26.87■■□□□ 1.89
LYSMD4-208ENST00000493256 HERVK_113P62684 666 aa26.86■■□□□ 1.89
LYSMD4-208ENST00000493256 PDE3AQ14432 1141 aa26.86■■□□□ 1.89
LYSMD4-208ENST00000493256 U2AF1L4Q8WU68 220 aaKnown RBP26.86■■□□□ 1.89
LYSMD4-208ENST00000493256 CRNKL1Q9BZJ0 848 aaKnown RBP26.86■■□□□ 1.89
LYSMD4-208ENST00000493256 PEX10O60683 326 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 SHMT1P34896 483 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 CERKLQ49MI3 558 aaPredicted RBP26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 USP17L2Q6R6M4 530 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 UBE2Q1Q7Z7E8 422 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 BOLA2Q9H3K6 86 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 TXNRD2Q9NNW7 524 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 GJD2Q9UKL4 321 aa26.85■■□□□ 1.89
LYSMD4-208ENST00000493256 POLR3DP05423 398 aaPredicted RBP26.84■■□□□ 1.89
LYSMD4-208ENST00000493256 LCORLQ8N3X6 602 aa26.84■■□□□ 1.89
LYSMD4-208ENST00000493256 PAG1Q9NWQ8 432 aa26.84■■□□□ 1.89
LYSMD4-208ENST00000493256 PLXNB2O15031 1838 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 ATP5JP18859 108 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 EVX2Q03828 476 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 RAB3GAP1Q15042 981 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 ZYXQ15942 572 aaKnown RBP26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 ABCB5Q2M3G0 1257 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 FEZ1Q99689 392 aa26.83■■□□□ 1.89
LYSMD4-208ENST00000493256 SGPL1O95470 568 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 GABPAQ06546 454 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 GPRC5AQ8NFJ5 357 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 SDR42E1Q8WUS8 393 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 C12orf42Q96LP6 360 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 MCM9Q9NXL9 1143 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 RBPJLQ9UBG7 517 aa26.82■■□□□ 1.88
LYSMD4-208ENST00000493256 SLFNL1Q499Z3 407 aa26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 HABP4Q5JVS0 413 aaKnown RBP26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 POTEEQ6S8J3 1075 aa26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 ACER1Q8TDN7 264 aa26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 HAUS7Q99871 368 aa26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 PAK6Q9NQU5 681 aaPredicted RBP26.81■■□□□ 1.88
LYSMD4-208ENST00000493256 ADD2P35612 726 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 DEFB118Q96PH6 123 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 LRRCC1Q9C099 1032 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 KIAA1683Q9H0B3 1180 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 ARMT1Q9H993 441 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 CABP5Q9NP86 173 aa26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 DCP1AQ9NPI6 582 aaPredicted RBP26.8■■□□□ 1.88
LYSMD4-208ENST00000493256 H0YGN5 161 aa26.79■■□□□ 1.88
LYSMD4-208ENST00000493256 SMARCA5O60264 1052 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms