RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SAFBQ15424 915 aaKnown RBP eCLIP14.81□□□□□ -0.04
PRAME-213ENST00000492657 FOXP4Q8IVH2 680 aaPredicted RBP14.81□□□□□ -0.04
PRAME-213ENST00000492657 JMYQ8N9B5 988 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
PRAME-213ENST00000492657 DEXIO95424 95 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 TM4SF1P30408 202 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 GTF2F1P35269 517 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■■□ 20.3
PRAME-213ENST00000492657 C16orf45Q96MC5 204 aaPredicted RBP14.8□□□□□ -0.04
PRAME-213ENST00000492657 VPS54Q9P1Q0 977 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 NID2Q14112 1375 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 EP400Q96L91 3159 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 CUTAO60888 179 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 NCAPHQ15003 741 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 FAM47AQ5JRC9 791 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 LRRC8AQ8IWT6 810 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.8□□□□□ -0.04
PRAME-213ENST00000492657 KCNH3Q9ULD8 1083 aa14.8□□□□□ -0.04
PRAME-213ENST00000492657 RBM6P78332 1123 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 METTL16Q86W50 562 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 BRIP1Q9BX63 1249 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 NYXQ9GZU5 481 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 CABP5Q9NP86 173 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 V9GY48 417 aaPredicted RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 MYH6P13533 1939 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 PKN1Q16512 942 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 EARS2Q5JPH6 523 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 IFIT1BQ5T764 474 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 TPTE2Q6XPS3 522 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 KRI1Q8N9T8 703 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 IFNKQ9P0W0 207 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 RTCBQ9Y3I0 505 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 UBAP1LF5GYI3 381 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 NPHP1O15259 732 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 LMOD1P29536 600 aaPredicted RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 NOM1Q5C9Z4 860 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 USP49Q70CQ1 688 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 TIGD1Q96MW7 591 aa14.79□□□□□ -0.04
PRAME-213ENST00000492657 GPR101Q96P66 508 aaPredicted RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 XPO4Q9C0E2 1151 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 CGNQ9P2M7 1197 aaKnown RBP14.79□□□□□ -0.04
PRAME-213ENST00000492657 SMC2O95347 1197 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 FUT2Q10981 343 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 FOXP1Q9H334 677 aaPredicted RBP14.78□□□□□ -0.04
PRAME-213ENST00000492657 DCP1AQ9NPI6 582 aaPredicted RBP14.78□□□□□ -0.04
PRAME-213ENST00000492657 TUBE1Q9UJT0 475 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 FAM237AA0A1B0GTK4 181 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 VGLL3A8MV65 326 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 ATP1A3P13637 1013 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 KRBA2Q6ZNG9 492 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 CNNM3Q8NE01 707 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 MTA3Q9BTC8 594 aa14.78□□□□□ -0.04
PRAME-213ENST00000492657 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRAME-213ENST00000492657 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
PRAME-213ENST00000492657 V9GYY5 206 aaPredicted RBP14.78□□□□□ -0.04
PRAME-213ENST00000492657 USP27XA6NNY8 438 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 UTP14CQ5TAP6 766 aaKnown RBP14.77□□□□□ -0.04
PRAME-213ENST00000492657 GRAMD1CQ8IYS0 662 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 PDILTQ8N807 584 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 HSD3B7Q9H2F3 369 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 USP21Q9UK80 565 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 PCDHA5Q9Y5H7 936 aa14.77□□□□□ -0.04
PRAME-213ENST00000492657 WNT7AO00755 349 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 SKILP12757 684 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 AKAP17AQ02040 695 aaKnown RBP14.77□□□□□ -0.05
PRAME-213ENST00000492657 TROAPQ12815 778 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 PTPN21Q16825 1174 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 CATIPQ7Z7H3 387 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.05
PRAME-213ENST00000492657 BPIFA3Q9BQP9 254 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 BTAF1O14981 1849 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 SCN7AQ01118 1682 aa14.77□□□□□ -0.05
PRAME-213ENST00000492657 BMP6P22004 513 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 PTPREP23469 700 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 GRIK5Q16478 980 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 ANKRD2Q9GZV1 360 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.76□□□□□ -0.051e-7■■□□□ 11.9
PRAME-213ENST00000492657 POLR2DO15514 142 aaKnown RBP14.76□□□□□ -0.05
PRAME-213ENST00000492657 VEGFAP15692 232 aaPredicted RBP14.76□□□□□ -0.05
PRAME-213ENST00000492657 PDE4BQ07343 736 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 ZNF771Q7L3S4 317 aaPredicted RBP14.76□□□□□ -0.05
PRAME-213ENST00000492657 TMC6Q7Z403 805 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 IQCA1Q86XH1 822 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 RNF26Q9BY78 433 aaPredicted RBP14.76□□□□□ -0.05
PRAME-213ENST00000492657 DUOX1Q9NRD9 1551 aa14.76□□□□□ -0.05
PRAME-213ENST00000492657 SEMA3EO15041 775 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 FGRP09769 529 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 USP17L8P0C7I0 530 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 CCZ1BP86790 482 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 CCZ1P86791 482 aaPredicted RBP14.75□□□□□ -0.05
PRAME-213ENST00000492657 NFIXQ14938 502 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 ZNF592Q92610 1267 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 CRNKL1Q9BZJ0 848 aaKnown RBP14.75□□□□□ -0.05
PRAME-213ENST00000492657 ANKIB1Q9P2G1 1089 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 SERTAD1Q9UHV2 236 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 RCAN1P53805 252 aa14.75□□□□□ -0.05
PRAME-213ENST00000492657 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms